Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03241

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
3,609,245	-		MIT1002_03240	0.73	+1.3
3,609,288	+		MIT1002_03240	0.75	+1.1
3,609,335	+		MIT1002_03240	0.78	-0.4
3,609,345	+		MIT1002_03240	0.79	-0.7
3,609,345	-		MIT1002_03240	0.79	+1.4
3,609,353	-		MIT1002_03240	0.79	-1.5
3,609,353	-		MIT1002_03240	0.79	+0.5
3,609,357	+		MIT1002_03240	0.80	-0.1
3,609,388	-		MIT1002_03240	0.81	-1.5
3,609,398	+		MIT1002_03240	0.82	+0.2
3,609,401	+		MIT1002_03240	0.82	-1.7
3,609,403	+		MIT1002_03240	0.82	+1.2
3,609,406	-		MIT1002_03240	0.83	-1.1
3,609,411	-		MIT1002_03240	0.83	+1.8
3,609,415	-		MIT1002_03240	0.83	+1.0
3,609,417	+		MIT1002_03240	0.83	-1.3
3,609,485	+		MIT1002_03240	0.87	-0.7
3,609,493	-		MIT1002_03240	0.88	+1.4
3,609,662	-				-0.1
3,609,662	-				+2.0
3,609,662	-				-0.6
3,609,676	-				+1.8
3,609,691	-				+1.6
3,609,727	-				+0.3
3,609,823	+				-1.3
3,609,862	-				+0.2
3,609,868	+				+0.1
3,609,878	+				-1.6
3,609,886	-				+1.9
3,609,886	-				-0.5
3,609,898	+				+0.3
3,610,044	+				-0.9
3,610,058	-				+0.4
3,610,059	+				+2.2
3,610,059	+				-1.8
3,610,067	-				-0.3
3,610,067	-				-0.3
3,610,194	+				+1.7
3,610,256	+				-0.8
3,610,304	-				-0.1
3,610,304	-				+2.8
3,610,332	+		MIT1002_03241	0.13	-1.8
3,610,332	+		MIT1002_03241	0.13	+0.1
3,610,402	+		MIT1002_03241	0.22	+2.1
3,610,402	+		MIT1002_03241	0.22	-0.0
3,610,422	-		MIT1002_03241	0.25	+0.6
3,610,447	-		MIT1002_03241	0.28	+0.8
3,610,537	-		MIT1002_03241	0.40	+0.8
3,610,553	-		MIT1002_03241	0.42	+1.7
3,610,562	+		MIT1002_03241	0.43	-0.0
3,610,663	+		MIT1002_03241	0.56	+1.0
3,610,709	-		MIT1002_03241	0.62	-0.2
3,610,724	-		MIT1002_03241	0.64	+1.5
3,610,730	+		MIT1002_03241	0.65	-0.6
3,610,738	-		MIT1002_03241	0.66	+0.1
3,610,738	-		MIT1002_03241	0.66	-0.1
3,610,738	-		MIT1002_03241	0.66	-1.4
3,610,753	+		MIT1002_03241	0.68	-0.0
3,610,761	-		MIT1002_03241	0.69	-1.0
3,610,761	-		MIT1002_03241	0.69	+0.4
3,610,774	+		MIT1002_03241	0.71	+0.2
3,610,899	-		MIT1002_03241	0.87	-0.1
3,610,952	-				-2.7
3,610,987	+				+1.0
3,611,008	+				-1.0
3,611,300	-		MIT1002_03242	0.17	+0.1
3,611,307	+		MIT1002_03242	0.17	-1.5
3,611,315	-		MIT1002_03242	0.18	-0.3
3,611,315	-		MIT1002_03242	0.18	-0.7
3,611,320	-		MIT1002_03242	0.18	+0.2
3,611,465	+		MIT1002_03242	0.29	+0.3
3,611,499	-		MIT1002_03242	0.32	-0.0
3,611,543	-		MIT1002_03242	0.35	-1.4
3,611,603	+		MIT1002_03242	0.39	-0.8
3,611,667	+		MIT1002_03242	0.44	-0.6
3,611,739	-		MIT1002_03242	0.49	-1.3
3,611,773	-		MIT1002_03242	0.52	-0.3
3,611,888	-		MIT1002_03242	0.60	+0.7
3,611,897	+		MIT1002_03242	0.61	+0.6
3,611,905	-		MIT1002_03242	0.62	-2.3
3,611,944	+		MIT1002_03242	0.64	+0.0
3,611,944	+		MIT1002_03242	0.64	-2.1
3,611,944	+		MIT1002_03242	0.64	-1.1
3,611,944	+		MIT1002_03242	0.64	-1.7
3,611,949	-		MIT1002_03242	0.65	-0.9
3,611,952	-		MIT1002_03242	0.65	-0.6
3,611,952	-		MIT1002_03242	0.65	-0.6
3,611,952	-		MIT1002_03242	0.65	+0.7
3,611,952	-		MIT1002_03242	0.65	-2.2
3,611,956	+		MIT1002_03242	0.65	-0.2