Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03154

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
3,514,704	+		MIT1002_03153	0.24	-1.3
3,514,821	-		MIT1002_03153	0.34	+0.1
3,514,831	+		MIT1002_03153	0.35	-0.8
3,514,845	+		MIT1002_03153	0.36	-2.0
3,514,846	+		MIT1002_03153	0.36	-0.3
3,514,867	-		MIT1002_03153	0.38	-1.3
3,514,899	+		MIT1002_03153	0.41	-0.9
3,514,907	-		MIT1002_03153	0.41	+2.2
3,514,939	-		MIT1002_03153	0.44	+0.1
3,515,038	+		MIT1002_03153	0.52	-0.5
3,515,078	+		MIT1002_03153	0.56	-0.9
3,515,092	-		MIT1002_03153	0.57	+1.0
3,515,094	+		MIT1002_03153	0.57	+0.8
3,515,130	-		MIT1002_03153	0.60	-1.5
3,515,392	-		MIT1002_03153	0.82	-0.4
3,515,409	+		MIT1002_03153	0.83	-0.6
3,515,466	+		MIT1002_03153	0.88	+1.5
3,515,623	-				-0.2
3,515,750	-				-0.3
3,515,799	+				+1.7
3,515,800	-				+0.7
3,515,800	-				-0.3
3,515,805	+				-1.9
3,515,807	-				-3.6
3,515,807	-				-0.5
3,515,807	-				+1.0
3,515,903	-		MIT1002_03154	0.17	-0.2
3,515,903	-		MIT1002_03154	0.17	-0.3
3,515,903	-		MIT1002_03154	0.17	-0.7
3,515,903	-		MIT1002_03154	0.17	-0.2
3,516,043	+		MIT1002_03154	0.28	-0.5
3,516,070	-		MIT1002_03154	0.30	-2.5
3,516,070	-		MIT1002_03154	0.30	-0.7
3,516,106	+		MIT1002_03154	0.33	-1.0
3,516,114	-		MIT1002_03154	0.34	+1.4
3,516,147	+		MIT1002_03154	0.36	+0.1
3,516,241	+		MIT1002_03154	0.44	-0.1
3,516,249	-		MIT1002_03154	0.45	-1.3
3,516,326	+		MIT1002_03154	0.51	+0.4
3,516,334	-		MIT1002_03154	0.51	-2.4
3,516,400	+		MIT1002_03154	0.57	+1.1
3,516,408	-		MIT1002_03154	0.57	+0.2
3,516,408	-		MIT1002_03154	0.57	+1.0
3,516,468	+		MIT1002_03154	0.62	+0.8
3,516,468	+		MIT1002_03154	0.62	-1.2
3,516,532	-		MIT1002_03154	0.67	-0.3
3,516,536	+		MIT1002_03154	0.67	-1.0
3,516,536	+		MIT1002_03154	0.67	-1.1
3,516,565	-		MIT1002_03154	0.70	+0.0
3,516,762	+		MIT1002_03154	0.85	-0.3
3,516,769	+		MIT1002_03154	0.86	-1.6
3,516,782	-		MIT1002_03154	0.87	-1.4
3,516,784	+		MIT1002_03154	0.87	+0.2
3,517,013	-				+0.1
3,517,013	-				+0.2
3,517,023	-				-0.4
3,517,023	-				-1.0
3,517,047	+				+0.9
3,517,055	-				-1.9
3,517,225	-				+0.1
3,517,237	+				-0.3
3,517,251	-				+0.6
3,517,285	-				-0.6
3,517,295	-				-0.4
3,517,327	+		MIT1002_03155	0.10	+0.8
3,517,440	+		MIT1002_03155	0.19	-1.2
3,517,482	-		MIT1002_03155	0.22	+1.3
3,517,494	+		MIT1002_03155	0.23	-0.3
3,517,494	+		MIT1002_03155	0.23	-0.8
3,517,506	-		MIT1002_03155	0.24	+1.8
3,517,600	+		MIT1002_03155	0.31	+1.4
3,517,743	+		MIT1002_03155	0.41	-0.3
3,517,744	-		MIT1002_03155	0.41	-2.6
3,517,829	+		MIT1002_03155	0.48	+1.8
3,517,829	+		MIT1002_03155	0.48	-0.2
3,517,829	+		MIT1002_03155	0.48	-3.0
3,517,843	+		MIT1002_03155	0.49	-1.5
3,517,844	+		MIT1002_03155	0.49	-2.6