Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02967

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
3,301,274	-		MIT1002_02966	0.74	-0.8
3,301,290	+		MIT1002_02966	0.75	-0.8
3,301,290	+		MIT1002_02966	0.75	-0.4
3,301,290	+		MIT1002_02966	0.75	-0.2
3,301,290	+		MIT1002_02966	0.75	+0.1
3,301,290	+		MIT1002_02966	0.75	-0.2
3,301,290	+		MIT1002_02966	0.75	+2.8
3,301,298	-		MIT1002_02966	0.76	-0.7
3,301,298	-		MIT1002_02966	0.76	+0.5
3,301,298	-		MIT1002_02966	0.76	-1.1
3,301,298	-		MIT1002_02966	0.76	-0.3
3,301,298	-		MIT1002_02966	0.76	-1.7
3,301,347	+		MIT1002_02966	0.80	-1.1
3,301,347	+		MIT1002_02966	0.80	+2.2
3,301,355	+		MIT1002_02966	0.81	-0.8
3,301,381	+		MIT1002_02966	0.83	+1.6
3,301,406	+		MIT1002_02966	0.85	+1.2
3,301,406	+		MIT1002_02966	0.85	-2.4
3,301,406	+		MIT1002_02966	0.85	-0.4
3,301,406	+		MIT1002_02966	0.85	-2.6
3,301,414	-		MIT1002_02966	0.85	+0.3
3,301,414	-		MIT1002_02966	0.85	-0.8
3,301,414	-		MIT1002_02966	0.85	-0.8
3,301,414	-		MIT1002_02966	0.85	-0.1
3,301,414	-		MIT1002_02966	0.85	+0.9
3,301,414	-		MIT1002_02966	0.85	-2.1
3,301,414	-		MIT1002_02966	0.85	+0.3
3,301,414	-		MIT1002_02966	0.85	+0.0
3,301,414	-		MIT1002_02966	0.85	+0.1
3,301,414	-		MIT1002_02966	0.85	-0.4
3,301,479	+				+0.2
3,301,487	+				+2.6
3,301,487	+				+1.5
3,301,487	-				+0.7
3,301,505	-				-0.7
3,301,580	-				-0.4
3,301,599	-				-0.7
3,301,618	+				+0.6
3,301,668	+				-0.9
3,301,676	-				+0.3
3,301,684	+				-0.6
3,301,708	+				-1.4
3,301,777	-				+0.7
3,301,849	-				-0.4
3,301,859	+				-0.1
3,301,864	+				-0.5
3,301,933	+				+0.9
3,301,933	+				+0.3
3,301,933	+				-2.1
3,301,941	-				+0.1
3,301,947	+				+0.1
3,301,955	-				-2.0
3,301,955	-				+0.4
3,301,960	-				-0.7
3,302,000	-				+1.8
3,302,001	+				+1.8
3,302,032	-				+1.0
3,302,032	-				-1.1
3,302,045	-				-0.7
3,302,056	+				+2.0
3,302,056	+				-0.8
3,302,235	+				+0.2
3,302,250	+				-0.7
3,302,258	-				-1.2
3,302,258	-				-0.9
3,302,258	-				-0.1
3,302,328	-				+0.6
3,302,328	-				+0.2
3,302,367	+		MIT1002_02967	0.14	-1.0
3,302,444	-		MIT1002_02967	0.23	-1.8
3,302,645	+		MIT1002_02967	0.45	+0.7
3,302,659	-		MIT1002_02967	0.47	-1.8
3,302,691	+		MIT1002_02967	0.51	-0.8
3,302,699	-		MIT1002_02967	0.52	-1.8
3,302,760	-		MIT1002_02967	0.58	-0.4
3,302,889	+		MIT1002_02967	0.73	-0.7
3,302,912	+		MIT1002_02967	0.76	-1.4
3,302,912	+		MIT1002_02967	0.76	+0.3
3,302,920	-		MIT1002_02967	0.76	+0.7
3,302,922	+		MIT1002_02967	0.77	-0.5
3,302,929	+		MIT1002_02967	0.78	+0.0
3,302,937	-		MIT1002_02967	0.78	-0.9
3,302,988	+		MIT1002_02967	0.84	-1.2
3,303,023	-		MIT1002_02967	0.88	-1.4
3,303,057	-				+2.0
3,303,057	-				-0.2
3,303,150	+				+1.0
3,303,258	-				+2.1
3,303,280	-				+1.1
3,303,292	-				-0.4
3,303,312	-				-1.3
3,303,441	+		MIT1002_02968	0.18	+1.5
3,303,467	+		MIT1002_02968	0.20	+1.2
3,303,467	+		MIT1002_02968	0.20	-0.1
3,303,467	+		MIT1002_02968	0.20	+0.9
3,303,467	+		MIT1002_02968	0.20	-0.5
3,303,475	-		MIT1002_02968	0.21	-1.2
3,303,475	-		MIT1002_02968	0.21	-1.3
3,303,518	+		MIT1002_02968	0.25	-1.2
3,303,530	-		MIT1002_02968	0.26	+1.7
3,303,576	-		MIT1002_02968	0.29	-1.4
3,303,638	+		MIT1002_02968	0.35	-0.7
3,303,703	+		MIT1002_02968	0.40	+1.0
3,303,721	+		MIT1002_02968	0.42	+0.9
3,303,721	+		MIT1002_02968	0.42	-1.7
3,303,739	-		MIT1002_02968	0.43	-0.2
3,303,739	-		MIT1002_02968	0.43	-0.5
3,303,739	-		MIT1002_02968	0.43	+3.9
3,303,739	-		MIT1002_02968	0.43	+1.2
3,303,739	-		MIT1002_02968	0.43	-0.5
3,303,741	+		MIT1002_02968	0.43	-0.1
3,303,769	+		MIT1002_02968	0.46	+0.1
3,303,854	-		MIT1002_02968	0.53	+0.4
3,303,902	+		MIT1002_02968	0.57	-0.2
3,303,910	-		MIT1002_02968	0.58	+1.2
3,303,934	+		MIT1002_02968	0.60	+1.0
3,303,952	+		MIT1002_02968	0.61	+0.7
3,303,952	+		MIT1002_02968	0.61	-0.1
3,303,952	+		MIT1002_02968	0.61	+0.6
3,303,952	+		MIT1002_02968	0.61	+3.1
3,303,960	-		MIT1002_02968	0.62	-0.4
3,303,983	-		MIT1002_02968	0.64	-1.1
3,303,994	+		MIT1002_02968	0.65	+0.3
3,304,002	-		MIT1002_02968	0.66	+1.3