Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02842

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
3,150,615	-				-0.8
3,150,633	+				+1.8
3,150,703	-				-0.0
3,150,708	+				-1.6
3,150,734	+				-1.5
3,150,742	-				+0.8
3,150,772	-		MIT1002_02841	0.10	+0.1
3,150,869	+		MIT1002_02841	0.23	+0.0
3,150,871	+		MIT1002_02841	0.23	-1.0
3,150,871	+		MIT1002_02841	0.23	-1.5
3,150,871	+		MIT1002_02841	0.23	+2.4
3,150,871	+		MIT1002_02841	0.23	+0.3
3,150,871	+		MIT1002_02841	0.23	+2.3
3,150,879	-		MIT1002_02841	0.24	+1.0
3,150,879	-		MIT1002_02841	0.24	-0.5
3,150,879	-		MIT1002_02841	0.24	+0.7
3,150,884	-		MIT1002_02841	0.25	+1.1
3,150,884	-		MIT1002_02841	0.25	-0.4
3,150,884	-		MIT1002_02841	0.25	-0.2
3,150,884	-		MIT1002_02841	0.25	-2.0
3,150,884	-		MIT1002_02841	0.25	-1.0
3,150,907	+		MIT1002_02841	0.28	+0.4
3,150,930	-		MIT1002_02841	0.31	+0.8
3,150,930	-		MIT1002_02841	0.31	+1.0
3,150,930	-		MIT1002_02841	0.31	+0.4
3,151,036	+		MIT1002_02841	0.45	-0.0
3,151,144	-		MIT1002_02841	0.59	+0.4
3,151,144	-		MIT1002_02841	0.59	+0.8
3,151,144	-		MIT1002_02841	0.59	+2.0
3,151,168	+		MIT1002_02841	0.62	+2.2
3,151,174	+		MIT1002_02841	0.63	+1.8
3,151,174	+		MIT1002_02841	0.63	+0.6
3,151,211	+		MIT1002_02841	0.68	+0.3
3,151,213	+		MIT1002_02841	0.68	-0.1
3,151,221	-		MIT1002_02841	0.69	-0.5
3,151,337	-		MIT1002_02841	0.84	+1.8
3,151,340	+		MIT1002_02841	0.85	+0.6
3,151,346	+		MIT1002_02841	0.85	-0.3
3,151,371	+		MIT1002_02841	0.89	-0.9
3,151,379	-		MIT1002_02841	0.90	+0.3
3,151,379	-		MIT1002_02841	0.90	+0.4
3,151,381	+				-0.4
3,151,424	-				-0.4
3,151,486	+				+1.0
3,151,575	+				-0.8
3,151,575	+				-1.7
3,151,583	-				-0.4
3,151,583	-				+1.2
3,151,633	+		MIT1002_02842	0.12	+0.2
3,151,748	+		MIT1002_02842	0.26	-0.5
3,151,818	+		MIT1002_02842	0.34	+0.1
3,151,823	+		MIT1002_02842	0.35	+0.3
3,151,826	-		MIT1002_02842	0.35	+0.0
3,151,831	+		MIT1002_02842	0.36	+0.9
3,151,831	+		MIT1002_02842	0.36	+1.7
3,151,838	+		MIT1002_02842	0.36	-0.3
3,151,838	+		MIT1002_02842	0.36	-0.3
3,151,838	+		MIT1002_02842	0.36	-0.6
3,151,839	-		MIT1002_02842	0.37	+0.1
3,151,857	+		MIT1002_02842	0.39	-1.4
3,151,865	-		MIT1002_02842	0.40	-0.4
3,151,865	-		MIT1002_02842	0.40	-1.5
3,151,865	-		MIT1002_02842	0.40	-0.3
3,151,872	+		MIT1002_02842	0.41	-1.8
3,151,872	+		MIT1002_02842	0.41	+2.0
3,151,872	+		MIT1002_02842	0.41	+1.5
3,151,872	+		MIT1002_02842	0.41	+1.0
3,151,880	-		MIT1002_02842	0.42	+2.7
3,151,880	-		MIT1002_02842	0.42	-0.9
3,151,880	-		MIT1002_02842	0.42	+0.3
3,151,880	-		MIT1002_02842	0.42	-0.5
3,151,880	-		MIT1002_02842	0.42	+0.9
3,151,880	-		MIT1002_02842	0.42	+2.8
3,151,880	-		MIT1002_02842	0.42	+0.7
3,151,880	-		MIT1002_02842	0.42	-0.1
3,151,922	-		MIT1002_02842	0.47	-0.3
3,151,961	-		MIT1002_02842	0.51	-2.3
3,151,996	+		MIT1002_02842	0.55	-1.8
3,152,065	+		MIT1002_02842	0.64	+0.1
3,152,092	-		MIT1002_02842	0.67	+0.5
3,152,111	+		MIT1002_02842	0.69	-0.1
3,152,111	+		MIT1002_02842	0.69	-0.3
3,152,120	-		MIT1002_02842	0.70	+1.5
3,152,167	+		MIT1002_02842	0.76	-0.7
3,152,179	+		MIT1002_02842	0.77	+0.6
3,152,179	+		MIT1002_02842	0.77	-1.1
3,152,179	+		MIT1002_02842	0.77	-0.8
3,152,179	+		MIT1002_02842	0.77	+0.8
3,152,187	-		MIT1002_02842	0.78	+0.2
3,152,237	+		MIT1002_02842	0.84	+1.3
3,152,245	-		MIT1002_02842	0.85	-0.8
3,152,259	-		MIT1002_02842	0.87	-0.1
3,152,306	-				-0.9
3,152,358	+				-0.6
3,152,493	-				-1.9
3,152,493	-				-1.0
3,152,529	-		MIT1002_02843	0.13	-0.3
3,152,534	-		MIT1002_02843	0.14	+0.6
3,152,534	-		MIT1002_02843	0.14	+1.2
3,152,534	-		MIT1002_02843	0.14	+2.3
3,152,558	-		MIT1002_02843	0.17	+0.8
3,152,558	-		MIT1002_02843	0.17	-0.4
3,152,598	-		MIT1002_02843	0.22	+0.4
3,152,650	+		MIT1002_02843	0.28	-1.2
3,152,650	+		MIT1002_02843	0.28	-0.5
3,152,658	-		MIT1002_02843	0.29	-2.5
3,152,849	-		MIT1002_02843	0.53	+1.2
3,153,015	-		MIT1002_02843	0.74	+0.6
3,153,084	+		MIT1002_02843	0.83	+0.3
3,153,092	-		MIT1002_02843	0.84	+0.4
3,153,100	-		MIT1002_02843	0.85	+1.3
3,153,150	+				+0.8
3,153,363	-				-1.5