Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02641

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
2,932,797	+				+0.3
2,932,807	-				-0.4
2,932,861	-		MIT1002_02640	0.13	+1.4
2,932,888	+		MIT1002_02640	0.16	-1.0
2,932,890	+		MIT1002_02640	0.16	-0.5
2,932,910	+		MIT1002_02640	0.18	+1.0
2,932,910	+		MIT1002_02640	0.18	-2.6
2,932,910	+		MIT1002_02640	0.18	-0.3
2,932,910	+		MIT1002_02640	0.18	+0.6
2,932,913	-		MIT1002_02640	0.19	+0.5
2,932,918	-		MIT1002_02640	0.19	+0.4
2,932,990	+		MIT1002_02640	0.28	+2.2
2,932,998	-		MIT1002_02640	0.29	+1.1
2,932,998	-		MIT1002_02640	0.29	-0.2
2,933,065	-		MIT1002_02640	0.36	-2.0
2,933,123	-		MIT1002_02640	0.43	-1.3
2,933,200	-		MIT1002_02640	0.52	+0.4
2,933,244	+		MIT1002_02640	0.57	-1.6
2,933,251	+		MIT1002_02640	0.58	-0.5
2,933,259	-		MIT1002_02640	0.59	-0.1
2,933,264	-		MIT1002_02640	0.60	+1.3
2,933,318	+		MIT1002_02640	0.66	+0.9
2,933,398	-		MIT1002_02640	0.75	-0.9
2,933,408	-		MIT1002_02640	0.76	-1.1
2,933,584	+				+0.1
2,933,611	+				-2.1
2,933,753	+				+0.9
2,933,863	+		MIT1002_02641	0.19	+2.7
2,933,944	+		MIT1002_02641	0.28	-0.2
2,933,944	+		MIT1002_02641	0.28	+0.5
2,933,944	+		MIT1002_02641	0.28	-0.2
2,934,009	-		MIT1002_02641	0.36	-1.1
2,934,108	-		MIT1002_02641	0.48	+0.7
2,934,147	-		MIT1002_02641	0.52	+2.0
2,934,147	-		MIT1002_02641	0.52	+1.3
2,934,161	+		MIT1002_02641	0.54	-0.1
2,934,164	-		MIT1002_02641	0.54	+0.2
2,934,260	+		MIT1002_02641	0.66	+1.3
2,934,379	-		MIT1002_02641	0.80	-2.6
2,934,410	+		MIT1002_02641	0.84	-1.3
2,934,410	+		MIT1002_02641	0.84	+0.5
2,934,424	-		MIT1002_02641	0.85	-0.8
2,934,495	+				-0.2
2,934,500	+				+0.4
2,934,507	+				-1.0
2,934,521	+				-1.2
2,934,548	+				+1.0
2,934,599	-				+1.1
2,934,610	-				+0.3
2,934,636	+				-0.3
2,934,762	-				-0.8
2,934,776	+				+0.4
2,934,819	-				-1.8
2,934,835	+				+0.1
2,934,871	-				+2.2
2,934,952	-				+0.5
2,935,060	-				+1.7
2,935,070	+				-1.3
2,935,172	+		MIT1002_02642	0.13	-0.3
2,935,242	+		MIT1002_02642	0.15	-0.7
2,935,243	+		MIT1002_02642	0.15	+1.4
2,935,350	+		MIT1002_02642	0.19	-1.0
2,935,384	-		MIT1002_02642	0.20	-0.0
2,935,384	-		MIT1002_02642	0.20	-0.5
2,935,385	+		MIT1002_02642	0.20	-1.0
2,935,393	-		MIT1002_02642	0.20	-2.9
2,935,440	-		MIT1002_02642	0.22	-2.3
2,935,442	+		MIT1002_02642	0.22	-1.5
2,935,484	-		MIT1002_02642	0.23	+0.3
2,935,519	+		MIT1002_02642	0.25	-0.1