Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02109

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
2,367,813	+		MIT1002_02108	0.16	-0.3
2,367,813	+		MIT1002_02108	0.16	+0.2
2,367,833	+		MIT1002_02108	0.18	-0.3
2,367,964	+		MIT1002_02108	0.29	-0.7
2,368,029	+		MIT1002_02108	0.34	-0.3
2,368,046	-		MIT1002_02108	0.36	-1.3
2,368,202	+		MIT1002_02108	0.49	+0.3
2,368,210	-		MIT1002_02108	0.50	-2.2
2,368,240	+		MIT1002_02108	0.52	-0.3
2,368,298	-		MIT1002_02108	0.57	-1.3
2,368,319	-		MIT1002_02108	0.59	-1.5
2,368,324	-		MIT1002_02108	0.60	+0.3
2,368,338	+		MIT1002_02108	0.61	-1.7
2,368,367	-		MIT1002_02108	0.63	-0.6
2,368,598	+		MIT1002_02108	0.83	-0.8
2,368,603	+		MIT1002_02108	0.83	+1.3
2,368,603	+		MIT1002_02108	0.83	+1.8
2,368,606	-		MIT1002_02108	0.84	-0.1
2,368,613	+		MIT1002_02108	0.84	+0.2
2,368,613	+		MIT1002_02108	0.84	-1.6
2,368,621	-		MIT1002_02108	0.85	-1.0
2,368,623	+		MIT1002_02108	0.85	+1.0
2,368,625	+		MIT1002_02108	0.85	+0.4
2,368,633	-		MIT1002_02108	0.86	+0.0
2,368,646	+		MIT1002_02108	0.87	-1.2
2,368,673	-		MIT1002_02108	0.89	-0.0
2,368,730	-				-2.3
2,368,848	-				-0.6
2,368,905	-		MIT1002_02109	0.10	+0.7
2,368,948	+		MIT1002_02109	0.15	+1.4
2,368,948	+		MIT1002_02109	0.15	-1.9
2,368,948	+		MIT1002_02109	0.15	+1.7
2,368,951	-		MIT1002_02109	0.15	-2.0
2,368,966	-		MIT1002_02109	0.16	-0.3
2,369,070	-		MIT1002_02109	0.27	-1.2
2,369,070	-		MIT1002_02109	0.27	-0.1
2,369,132	+		MIT1002_02109	0.33	-1.2
2,369,144	+		MIT1002_02109	0.34	-0.2
2,369,233	-		MIT1002_02109	0.43	+1.0
2,369,248	-		MIT1002_02109	0.44	+0.1
2,369,248	-		MIT1002_02109	0.44	-0.2
2,369,318	-		MIT1002_02109	0.51	-0.2
2,369,333	-		MIT1002_02109	0.53	-1.0
2,369,365	+		MIT1002_02109	0.56	-1.6
2,369,389	+		MIT1002_02109	0.58	+3.4
2,369,440	-		MIT1002_02109	0.63	+0.9
2,369,464	-		MIT1002_02109	0.65	-0.4
2,369,464	-		MIT1002_02109	0.65	-1.4
2,369,534	+		MIT1002_02109	0.72	+0.2
2,369,534	+		MIT1002_02109	0.72	+1.5
2,369,534	+		MIT1002_02109	0.72	+0.6
2,369,542	-		MIT1002_02109	0.73	+0.0
2,369,600	+		MIT1002_02109	0.79	-0.5
2,369,615	+		MIT1002_02109	0.80	-1.9
2,369,661	-		MIT1002_02109	0.85	+0.2
2,369,782	+				-1.6
2,369,797	+				+2.0
2,369,894	-				-1.6
2,370,058	-				+1.6
2,370,078	-				-1.0
2,370,079	-				+2.6
2,370,206	+				+1.4
2,370,214	-				-0.5
2,370,214	-				-1.0
2,370,214	-				-0.3
2,370,214	-				+0.4
2,370,295	-		MIT1002_02110	0.14	-0.5
2,370,313	+		MIT1002_02110	0.16	-1.0
2,370,436	-		MIT1002_02110	0.28	+0.6
2,370,528	-		MIT1002_02110	0.38	+1.8
2,370,541	-		MIT1002_02110	0.39	-1.3
2,370,541	-		MIT1002_02110	0.39	+0.7
2,370,541	-		MIT1002_02110	0.39	+1.8
2,370,591	+		MIT1002_02110	0.44	+0.4
2,370,593	+		MIT1002_02110	0.44	+0.3
2,370,593	+		MIT1002_02110	0.44	-0.9
2,370,629	+		MIT1002_02110	0.48	+1.8
2,370,641	+		MIT1002_02110	0.49	+0.8
2,370,658	+		MIT1002_02110	0.50	-1.3
2,370,714	+		MIT1002_02110	0.56	+0.8
2,370,721	+		MIT1002_02110	0.57	+0.8
2,370,721	+		MIT1002_02110	0.57	-0.2