Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02050

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
2,306,621	-		MIT1002_02049	0.77	-1.8
2,306,698	+		MIT1002_02049	0.80	+1.1
2,306,732	+		MIT1002_02049	0.81	+1.5
2,306,821	+		MIT1002_02049	0.84	-0.3
2,306,829	-		MIT1002_02049	0.84	-1.5
2,306,901	+		MIT1002_02049	0.87	+0.5
2,306,955	+		MIT1002_02049	0.89	-0.1
2,307,008	+				-0.3
2,307,150	+				-0.2
2,307,150	+				+1.1
2,307,167	-				+0.3
2,307,167	-				+1.5
2,307,201	+				+1.5
2,307,209	-				-0.6
2,307,213	+				-0.6
2,307,226	+				+0.2
2,307,234	-				-0.3
2,307,234	-				+0.8
2,307,335	-				-0.6
2,307,371	+				+0.2
2,307,393	-				+0.4
2,307,502	+				-0.5
2,307,557	+				+1.9
2,307,565	-				-0.2
2,307,565	-				-0.4
2,307,577	-				-2.3
2,307,627	+		MIT1002_02050	0.11	+0.5
2,307,627	+		MIT1002_02050	0.11	-1.2
2,307,634	+		MIT1002_02050	0.11	+1.0
2,307,635	-		MIT1002_02050	0.12	-0.3
2,307,641	-		MIT1002_02050	0.12	-0.4
2,307,694	-		MIT1002_02050	0.18	+0.1
2,307,696	-		MIT1002_02050	0.18	+0.8
2,307,701	+		MIT1002_02050	0.19	-3.0
2,307,709	-		MIT1002_02050	0.19	-0.8
2,307,709	-		MIT1002_02050	0.19	+1.0
2,307,709	-		MIT1002_02050	0.19	+1.7
2,307,709	-		MIT1002_02050	0.19	+0.8
2,307,711	+		MIT1002_02050	0.20	+0.2
2,307,711	+		MIT1002_02050	0.20	-2.1
2,307,711	-		MIT1002_02050	0.20	-0.5
2,307,730	+		MIT1002_02050	0.22	-0.2
2,307,791	-		MIT1002_02050	0.28	+0.1
2,307,813	+		MIT1002_02050	0.30	-0.4
2,307,852	-		MIT1002_02050	0.35	+0.1
2,307,857	-		MIT1002_02050	0.35	-1.5
2,307,896	-		MIT1002_02050	0.39	+0.8
2,307,994	+		MIT1002_02050	0.50	+0.3
2,308,056	+		MIT1002_02050	0.56	+0.0
2,308,272	+		MIT1002_02050	0.79	-0.5
2,308,272	+		MIT1002_02050	0.79	-0.2
2,308,272	+		MIT1002_02050	0.79	-0.9
2,308,272	+		MIT1002_02050	0.79	+0.3
2,308,272	+		MIT1002_02050	0.79	+0.1
2,308,272	+		MIT1002_02050	0.79	-1.8
2,308,280	-		MIT1002_02050	0.80	+0.9
2,308,280	-		MIT1002_02050	0.80	+0.7
2,308,282	-		MIT1002_02050	0.80	+0.4
2,308,301	-		MIT1002_02050	0.82	-0.9
2,308,372	-		MIT1002_02050	0.90	-1.2
2,308,396	+				-2.4
2,308,570	-				+0.9
2,308,873	+		MIT1002_02051	0.24	-0.9
2,308,925	-		MIT1002_02051	0.30	+0.2
2,308,961	+		MIT1002_02051	0.33	+0.3
2,309,042	+		MIT1002_02051	0.42	-1.1
2,309,042	+		MIT1002_02051	0.42	-1.0
2,309,050	-		MIT1002_02051	0.43	+0.4
2,309,050	-		MIT1002_02051	0.43	-0.1
2,309,050	-		MIT1002_02051	0.43	+0.9
2,309,080	-		MIT1002_02051	0.46	+0.6
2,309,080	-		MIT1002_02051	0.46	+1.4
2,309,084	+		MIT1002_02051	0.46	+0.2
2,309,092	-		MIT1002_02051	0.47	+1.0
2,309,102	-		MIT1002_02051	0.48	-1.8
2,309,159	+		MIT1002_02051	0.54	-0.1
2,309,167	-		MIT1002_02051	0.55	-0.2
2,309,175	-		MIT1002_02051	0.56	+0.8
2,309,227	+		MIT1002_02051	0.61	-1.6
2,309,327	+		MIT1002_02051	0.72	-0.2
2,309,333	-		MIT1002_02051	0.72	-0.4
2,309,354	-		MIT1002_02051	0.75	+0.5
2,309,391	+		MIT1002_02051	0.79	+0.6
2,309,391	+		MIT1002_02051	0.79	-1.2
2,309,431	-		MIT1002_02051	0.83	+2.1