Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02046

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
2,297,976	+		MIT1002_02045	0.33	-1.5
2,298,064	+		MIT1002_02045	0.39	+0.9
2,298,072	-		MIT1002_02045	0.40	+0.8
2,298,073	-		MIT1002_02045	0.40	-1.6
2,298,118	+		MIT1002_02045	0.43	-1.5
2,298,118	+		MIT1002_02045	0.43	+1.7
2,298,118	+		MIT1002_02045	0.43	+0.8
2,298,190	+		MIT1002_02045	0.48	+1.0
2,298,198	-		MIT1002_02045	0.48	-0.1
2,298,245	-		MIT1002_02045	0.52	+0.4
2,298,326	-		MIT1002_02045	0.57	-0.1
2,298,583	+		MIT1002_02045	0.75	+1.6
2,298,756	+		MIT1002_02045	0.88	+1.3
2,298,764	-		MIT1002_02045	0.88	-0.4
2,298,809	-				-0.1
2,298,814	-				+1.7
2,298,831	-				-2.1
2,298,855	+				+0.2
2,298,928	-				-0.9
2,298,933	+				-0.2
2,298,936	-				-1.0
2,298,936	-				-1.4
2,298,941	-				-1.9
2,298,941	-				-1.1
2,298,941	-				-0.4
2,299,001	-				-0.6
2,299,194	+		MIT1002_02046	0.17	-1.5
2,299,199	+		MIT1002_02046	0.17	+0.3
2,299,229	+		MIT1002_02046	0.19	+0.2
2,299,229	+		MIT1002_02046	0.19	-0.4
2,299,249	+		MIT1002_02046	0.20	+1.1
2,299,495	-		MIT1002_02046	0.36	+0.9
2,299,510	+		MIT1002_02046	0.37	-0.4
2,299,616	-		MIT1002_02046	0.44	-0.3
2,299,647	+		MIT1002_02046	0.46	+0.7
2,299,704	+		MIT1002_02046	0.50	-1.0
2,299,716	+		MIT1002_02046	0.51	+0.5
2,299,718	-		MIT1002_02046	0.51	+1.0
2,299,827	-		MIT1002_02046	0.58	+2.2
2,299,863	-		MIT1002_02046	0.60	+1.1
2,299,896	-		MIT1002_02046	0.62	-1.0
2,299,916	+		MIT1002_02046	0.64	+0.7
2,299,975	+		MIT1002_02046	0.67	-0.6
2,299,975	+		MIT1002_02046	0.67	-0.7
2,299,975	+		MIT1002_02046	0.67	+0.5
2,299,983	-		MIT1002_02046	0.68	+1.6
2,299,983	-		MIT1002_02046	0.68	+0.7
2,300,042	+		MIT1002_02046	0.72	-1.3
2,300,114	-		MIT1002_02046	0.76	+0.0
2,300,116	+		MIT1002_02046	0.77	+0.1
2,300,124	-		MIT1002_02046	0.77	+0.6
2,300,185	+		MIT1002_02046	0.81	-0.3
2,300,210	-		MIT1002_02046	0.83	+0.1
2,300,285	+		MIT1002_02046	0.88	+0.5
2,300,376	-				-0.4
2,300,383	+				+0.3
2,300,391	-				-0.9
2,300,741	+				-1.5
2,300,957	-		MIT1002_02047	0.13	+1.1
2,300,988	+		MIT1002_02047	0.15	-1.6
2,301,022	-		MIT1002_02047	0.18	-0.1
2,301,092	+		MIT1002_02047	0.23	-0.6
2,301,111	+		MIT1002_02047	0.24	+0.1
2,301,119	-		MIT1002_02047	0.25	-0.4
2,301,239	+		MIT1002_02047	0.33	+0.8
2,301,263	+		MIT1002_02047	0.35	-0.8
2,301,264	-		MIT1002_02047	0.35	+1.5
2,301,271	-		MIT1002_02047	0.36	+0.4
2,301,277	-		MIT1002_02047	0.36	+1.4
2,301,291	-		MIT1002_02047	0.37	-0.2
2,301,363	+		MIT1002_02047	0.42	+0.5