Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01920

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
2,126,163	-				+1.2
2,126,163	-				+0.5
2,126,193	+				+2.2
2,126,338	-		MIT1002_01919	0.15	+3.2
2,126,367	+		MIT1002_01919	0.18	+0.3
2,126,372	+		MIT1002_01919	0.19	-0.5
2,126,375	-		MIT1002_01919	0.19	-0.4
2,126,385	-		MIT1002_01919	0.20	-0.6
2,126,396	+		MIT1002_01919	0.21	-2.1
2,126,396	+		MIT1002_01919	0.21	+1.1
2,126,411	+		MIT1002_01919	0.23	+0.3
2,126,453	-		MIT1002_01919	0.28	-0.2
2,126,463	-		MIT1002_01919	0.29	+0.3
2,126,487	-		MIT1002_01919	0.31	+0.7
2,126,531	+		MIT1002_01919	0.36	-2.3
2,126,566	+		MIT1002_01919	0.40	+0.1
2,126,644	+		MIT1002_01919	0.49	+2.5
2,126,710	-		MIT1002_01919	0.56	-0.3
2,126,726	+		MIT1002_01919	0.58	+0.1
2,126,726	+		MIT1002_01919	0.58	+0.3
2,126,734	-		MIT1002_01919	0.59	-0.2
2,126,734	-		MIT1002_01919	0.59	-0.6
2,126,734	-		MIT1002_01919	0.59	+1.1
2,126,787	+		MIT1002_01919	0.65	-1.7
2,126,803	+		MIT1002_01919	0.66	+1.3
2,126,815	-		MIT1002_01919	0.68	-1.5
2,126,820	-		MIT1002_01919	0.68	-1.0
2,126,872	-		MIT1002_01919	0.74	-0.6
2,126,971	+		MIT1002_01919	0.85	+0.8
2,126,984	-		MIT1002_01919	0.86	+1.3
2,127,032	+				-0.6
2,127,091	+				+2.7
2,127,091	+				+2.1
2,127,114	+				+2.5
2,127,151	+				-0.7
2,127,151	+				+0.6
2,127,151	+				-0.3
2,127,151	+				+1.3
2,127,151	+				-1.5
2,127,151	+				-1.1
2,127,151	+				-0.8
2,127,159	-				-0.4
2,127,159	-				-0.6
2,127,159	-				+0.5
2,127,233	+				-1.7
2,127,233	+				-1.0
2,127,291	+		MIT1002_01920	0.10	+0.2
2,127,294	+		MIT1002_01920	0.11	-0.9
2,127,296	+		MIT1002_01920	0.11	-1.5
2,127,296	+		MIT1002_01920	0.11	-0.0
2,127,296	+		MIT1002_01920	0.11	-1.5
2,127,296	+		MIT1002_01920	0.11	-0.8
2,127,299	-		MIT1002_01920	0.11	+1.7
2,127,301	+		MIT1002_01920	0.11	-0.3
2,127,301	+		MIT1002_01920	0.11	-0.3
2,127,301	+		MIT1002_01920	0.11	-2.4
2,127,304	-		MIT1002_01920	0.11	+0.1
2,127,304	-		MIT1002_01920	0.11	-1.3
2,127,304	-		MIT1002_01920	0.11	-1.7
2,127,304	-		MIT1002_01920	0.11	-1.9
2,127,304	-		MIT1002_01920	0.11	+0.8
2,127,304	-		MIT1002_01920	0.11	+1.3
2,127,309	-		MIT1002_01920	0.11	-0.3
2,127,360	-		MIT1002_01920	0.14	-0.3
2,127,373	+		MIT1002_01920	0.15	-1.1
2,127,397	+		MIT1002_01920	0.17	-0.5
2,127,416	-		MIT1002_01920	0.18	+0.5
2,127,476	+		MIT1002_01920	0.21	+0.8
2,127,758	+		MIT1002_01920	0.38	-1.4
2,127,796	-		MIT1002_01920	0.41	+0.7
2,127,958	+		MIT1002_01920	0.50	-0.1
2,127,975	+		MIT1002_01920	0.51	+1.5
2,127,989	+		MIT1002_01920	0.52	+0.1
2,128,058	+		MIT1002_01920	0.56	-1.1
2,128,160	+		MIT1002_01920	0.63	+0.6
2,128,160	+		MIT1002_01920	0.63	+1.2
2,128,168	-		MIT1002_01920	0.63	-1.5
2,128,191	-		MIT1002_01920	0.64	-2.6
2,128,217	-		MIT1002_01920	0.66	-3.3
2,128,276	+		MIT1002_01920	0.69	-1.2
2,128,276	+		MIT1002_01920	0.69	-1.6
2,128,276	+		MIT1002_01920	0.69	-0.3
2,128,284	-		MIT1002_01920	0.70	+1.7
2,128,284	-		MIT1002_01920	0.70	-1.3
2,128,297	-		MIT1002_01920	0.71	-1.0
2,128,355	-		MIT1002_01920	0.74	-0.4
2,128,355	-		MIT1002_01920	0.74	-2.0
2,128,388	+		MIT1002_01920	0.76	+3.1
2,128,537	+		MIT1002_01920	0.85	+0.6
2,128,744	+				+1.0
2,128,746	+				-2.1
2,128,845	+				+0.0
2,128,845	+				+0.9
2,128,845	+				-1.3
2,128,845	+				-1.7
2,128,950	-		MIT1002_01921	0.18	-0.4
2,129,005	-		MIT1002_01921	0.25	+0.1
2,129,156	-		MIT1002_01921	0.46	+0.7
2,129,252	+		MIT1002_01921	0.59	-0.2
2,129,265	+		MIT1002_01921	0.60	+0.8
2,129,273	-		MIT1002_01921	0.62	-1.0
2,129,293	-		MIT1002_01921	0.64	-0.2
2,129,325	+		MIT1002_01921	0.69	+2.2
2,129,347	+		MIT1002_01921	0.72	+0.1
2,129,375	-		MIT1002_01921	0.75	-1.2
2,129,375	-		MIT1002_01921	0.75	+0.3
2,129,489	-				+0.1
2,129,535	+				-1.3
2,129,535	+				-0.5
2,129,543	-				+3.2
2,129,549	+				-0.4
2,129,662	-				-1.7