Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01657

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
1,829,428	-		MIT1002_01656	0.61	-2.3
1,829,486	-		MIT1002_01656	0.65	+0.1
1,829,528	+		MIT1002_01656	0.68	-2.4
1,829,552	-		MIT1002_01656	0.70	-1.5
1,829,560	-		MIT1002_01656	0.71	-2.3
1,829,672	+		MIT1002_01656	0.80	-0.6
1,829,680	-		MIT1002_01656	0.80	+2.7
1,829,680	-		MIT1002_01656	0.80	+0.8
1,829,686	+		MIT1002_01656	0.81	-1.6
1,829,786	+		MIT1002_01656	0.88	-1.8
1,829,904	+				+1.9
1,829,911	+				-0.6
1,829,979	+				+0.0
1,830,057	-				-2.2
1,830,161	-				+0.2
1,830,171	-				-1.2
1,830,206	+				-0.2
1,830,349	+				-0.3
1,830,385	-				-2.3
1,830,558	+		MIT1002_01657	0.16	-1.0
1,830,589	-		MIT1002_01657	0.20	-0.7
1,830,672	-		MIT1002_01657	0.29	-1.0
1,830,681	+		MIT1002_01657	0.30	+1.6
1,830,681	+		MIT1002_01657	0.30	+0.4
1,830,689	-		MIT1002_01657	0.31	-1.1
1,830,709	+		MIT1002_01657	0.34	-3.1
1,830,755	+		MIT1002_01657	0.39	+0.2
1,830,943	+		MIT1002_01657	0.61	+1.3
1,831,039	+		MIT1002_01657	0.73	+0.6
1,831,063	+		MIT1002_01657	0.76	+0.1
1,831,115	-		MIT1002_01657	0.82	+0.0
1,831,163	-		MIT1002_01657	0.87	-1.7
1,831,247	-				-0.8
1,831,247	-				-3.0
1,831,247	-				+1.6
1,831,261	-				+0.5
1,831,263	+				-1.0
1,831,263	+				-0.7
1,831,263	-				-1.0
1,831,394	-		MIT1002_01658	0.10	-1.4
1,831,394	-		MIT1002_01658	0.10	+0.8
1,831,403	-		MIT1002_01658	0.12	-0.4
1,831,420	-		MIT1002_01658	0.14	+0.1
1,831,490	+		MIT1002_01658	0.22	+0.1
1,831,490	+		MIT1002_01658	0.22	+0.4
1,831,498	-		MIT1002_01658	0.23	-1.0
1,831,502	+		MIT1002_01658	0.24	-2.2
1,831,703	-		MIT1002_01658	0.48	+0.3
1,831,744	-		MIT1002_01658	0.53	+0.5
1,831,788	+		MIT1002_01658	0.59	+1.5
1,831,833	-		MIT1002_01658	0.64	-1.2
1,831,868	+		MIT1002_01658	0.69	+0.9
1,831,868	+		MIT1002_01658	0.69	+2.1
1,831,876	-		MIT1002_01658	0.69	-1.5
1,831,876	-		MIT1002_01658	0.69	+0.4
1,831,876	-		MIT1002_01658	0.69	-0.1
1,831,876	-		MIT1002_01658	0.69	+0.1
1,831,954	+		MIT1002_01658	0.79	-1.5
1,832,036	-		MIT1002_01658	0.89	+0.3
1,832,107	-				+0.9
1,832,146	+				+1.0
1,832,173	+				-0.3
1,832,174	-				-1.9
1,832,265	-				-0.4