Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01627

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
1,792,245	-		MIT1002_01626	0.19	+0.4
1,792,256	+		MIT1002_01626	0.20	+0.1
1,792,256	+		MIT1002_01626	0.20	-0.5
1,792,258	+		MIT1002_01626	0.20	-0.3
1,792,264	-		MIT1002_01626	0.21	+0.2
1,792,264	-		MIT1002_01626	0.21	-0.6
1,792,265	-		MIT1002_01626	0.21	+0.6
1,792,265	-		MIT1002_01626	0.21	-0.5
1,792,276	-		MIT1002_01626	0.22	+0.7
1,792,276	-		MIT1002_01626	0.22	-1.4
1,792,282	+		MIT1002_01626	0.22	-1.4
1,792,282	+		MIT1002_01626	0.22	+0.1
1,792,282	+		MIT1002_01626	0.22	-1.1
1,792,282	+		MIT1002_01626	0.22	-0.5
1,792,282	+		MIT1002_01626	0.22	-0.1
1,792,282	+		MIT1002_01626	0.22	+1.3
1,792,282	+		MIT1002_01626	0.22	+0.2
1,792,282	+		MIT1002_01626	0.22	+1.2
1,792,290	-		MIT1002_01626	0.23	-0.2
1,792,290	-		MIT1002_01626	0.23	+0.5
1,792,290	-		MIT1002_01626	0.23	-1.8
1,792,290	-		MIT1002_01626	0.23	-0.2
1,792,290	-		MIT1002_01626	0.23	+0.3
1,792,290	-		MIT1002_01626	0.23	-0.2
1,792,290	-		MIT1002_01626	0.23	+1.1
1,792,344	+		MIT1002_01626	0.27	+0.2
1,792,344	+		MIT1002_01626	0.27	+0.6
1,792,344	+		MIT1002_01626	0.27	-0.3
1,792,349	+		MIT1002_01626	0.28	+0.5
1,792,352	-		MIT1002_01626	0.28	+1.6
1,792,352	-		MIT1002_01626	0.28	+0.6
1,792,382	+		MIT1002_01626	0.30	-0.5
1,792,442	+		MIT1002_01626	0.35	-0.9
1,792,442	+		MIT1002_01626	0.35	+0.9
1,792,447	+		MIT1002_01626	0.36	-1.9
1,792,450	-		MIT1002_01626	0.36	-0.5
1,792,450	-		MIT1002_01626	0.36	-0.5
1,792,450	-		MIT1002_01626	0.36	+1.6
1,792,460	-		MIT1002_01626	0.37	-1.2
1,792,516	+		MIT1002_01626	0.41	+0.6
1,792,560	-		MIT1002_01626	0.45	+0.2
1,792,563	+		MIT1002_01626	0.45	-2.0
1,792,571	-		MIT1002_01626	0.46	-0.1
1,792,571	-		MIT1002_01626	0.46	-2.7
1,792,572	+		MIT1002_01626	0.46	+0.0
1,792,586	-		MIT1002_01626	0.47	-1.3
1,792,598	+		MIT1002_01626	0.48	+0.9
1,792,600	+		MIT1002_01626	0.48	-0.2
1,792,600	+		MIT1002_01626	0.48	-2.2
1,792,600	+		MIT1002_01626	0.48	+0.5
1,792,600	+		MIT1002_01626	0.48	+0.9
1,792,600	+		MIT1002_01626	0.48	-0.3
1,792,600	+		MIT1002_01626	0.48	+2.2
1,792,600	+		MIT1002_01626	0.48	-1.6
1,792,600	+		MIT1002_01626	0.48	-0.5
1,792,600	+		MIT1002_01626	0.48	+1.5
1,792,600	+		MIT1002_01626	0.48	+1.6
1,792,600	+		MIT1002_01626	0.48	+0.3
1,792,600	+		MIT1002_01626	0.48	-1.1
1,792,600	+		MIT1002_01626	0.48	-1.9
1,792,600	+		MIT1002_01626	0.48	+1.1
1,792,600	+		MIT1002_01626	0.48	+1.3
1,792,600	+		MIT1002_01626	0.48	-2.9
1,792,600	+		MIT1002_01626	0.48	+1.1
1,792,600	+		MIT1002_01626	0.48	+0.5
1,792,600	+		MIT1002_01626	0.48	+0.1
1,792,600	+		MIT1002_01626	0.48	+1.4
1,792,600	+		MIT1002_01626	0.48	+1.4
1,792,600	+		MIT1002_01626	0.48	-0.9
1,792,606	+		MIT1002_01626	0.49	+1.1
1,792,606	-		MIT1002_01626	0.49	+1.0
1,792,606	-		MIT1002_01626	0.49	+2.3
1,792,608	-		MIT1002_01626	0.49	-0.3
1,792,608	-		MIT1002_01626	0.49	+0.7
1,792,608	-		MIT1002_01626	0.49	-0.5
1,792,608	-		MIT1002_01626	0.49	-0.1
1,792,608	-		MIT1002_01626	0.49	+0.5
1,792,608	-		MIT1002_01626	0.49	+2.5
1,792,608	-		MIT1002_01626	0.49	+1.1
1,792,608	-		MIT1002_01626	0.49	+2.9
1,792,608	-		MIT1002_01626	0.49	+1.6
1,792,608	-		MIT1002_01626	0.49	+1.6
1,792,608	-		MIT1002_01626	0.49	+3.5
1,792,608	-		MIT1002_01626	0.49	-0.4
1,792,608	-		MIT1002_01626	0.49	-0.9
1,792,608	-		MIT1002_01626	0.49	+1.2
1,792,608	-		MIT1002_01626	0.49	-0.2
1,792,608	-		MIT1002_01626	0.49	-0.5
1,792,608	-		MIT1002_01626	0.49	-0.7
1,792,608	-		MIT1002_01626	0.49	-0.1
1,792,608	-		MIT1002_01626	0.49	-1.6
1,792,608	-		MIT1002_01626	0.49	-1.6
1,792,608	-		MIT1002_01626	0.49	-0.8
1,792,608	-		MIT1002_01626	0.49	-0.7
1,792,608	-		MIT1002_01626	0.49	+1.3
1,792,622	+		MIT1002_01626	0.50	+2.0
1,792,622	+		MIT1002_01626	0.50	-0.1
1,792,630	-		MIT1002_01626	0.51	-0.2
1,792,632	+		MIT1002_01626	0.51	-1.1
1,792,632	+		MIT1002_01626	0.51	-0.6
1,792,632	+		MIT1002_01626	0.51	-1.0
1,792,632	+		MIT1002_01626	0.51	-0.0
1,792,637	+		MIT1002_01626	0.51	-0.1
1,792,640	-		MIT1002_01626	0.51	+0.8
1,792,640	-		MIT1002_01626	0.51	-1.1
1,792,640	-		MIT1002_01626	0.51	-0.7
1,792,640	-		MIT1002_01626	0.51	-0.7
1,792,642	+		MIT1002_01626	0.52	-0.2
1,792,642	+		MIT1002_01626	0.52	+0.8
1,792,642	+		MIT1002_01626	0.52	+0.0
1,792,650	-		MIT1002_01626	0.52	+0.5
1,792,650	-		MIT1002_01626	0.52	+1.3
1,792,688	-		MIT1002_01626	0.55	-0.2
1,792,755	+		MIT1002_01626	0.61	-0.1
1,792,755	+		MIT1002_01626	0.61	-0.5
1,792,755	+		MIT1002_01626	0.61	+0.8
1,792,755	+		MIT1002_01626	0.61	+1.3
1,792,755	+		MIT1002_01626	0.61	-0.0
1,792,755	+		MIT1002_01626	0.61	+0.2
1,792,763	-		MIT1002_01626	0.61	-0.3
1,792,763	-		MIT1002_01626	0.61	+0.8
1,792,763	-		MIT1002_01626	0.61	-0.9
1,792,763	-		MIT1002_01626	0.61	-1.3
1,792,763	-		MIT1002_01626	0.61	+0.2
1,792,763	-		MIT1002_01626	0.61	+1.3
1,792,763	-		MIT1002_01626	0.61	+1.6
1,792,765	+		MIT1002_01626	0.62	+0.7
1,792,765	+		MIT1002_01626	0.62	+1.9
1,792,765	+		MIT1002_01626	0.62	-0.9
1,792,765	+		MIT1002_01626	0.62	-1.5
1,792,765	+		MIT1002_01626	0.62	+0.0
1,792,773	-		MIT1002_01626	0.62	-0.0
1,792,773	-		MIT1002_01626	0.62	+0.3
1,792,773	-		MIT1002_01626	0.62	+3.2
1,792,773	-		MIT1002_01626	0.62	+0.7
1,792,775	-		MIT1002_01626	0.62	+1.9
1,792,781	-		MIT1002_01626	0.63	+2.6
1,792,801	+		MIT1002_01626	0.64	-0.2
1,792,801	+		MIT1002_01626	0.64	+1.6
1,792,839	+		MIT1002_01626	0.68	+1.3
1,792,849	+		MIT1002_01626	0.68	-0.8
1,792,862	+		MIT1002_01626	0.69	-0.2
1,792,870	-		MIT1002_01626	0.70	+1.1
1,792,877	+		MIT1002_01626	0.71	+0.3
1,792,877	+		MIT1002_01626	0.71	+0.9
1,792,877	-		MIT1002_01626	0.71	+0.3
1,792,955	+		MIT1002_01626	0.77	-0.4
1,793,004	+		MIT1002_01626	0.81	-1.3
1,793,012	+		MIT1002_01626	0.82	-0.5
1,793,012	+		MIT1002_01626	0.82	+2.1
1,793,012	-		MIT1002_01626	0.82	-0.3
1,793,020	-		MIT1002_01626	0.82	-1.8
1,793,020	-		MIT1002_01626	0.82	+0.1
1,793,027	-		MIT1002_01626	0.83	+2.3
1,793,029	-		MIT1002_01626	0.83	+0.5
1,793,092	-		MIT1002_01626	0.88	-0.2
1,793,159	+				+0.2
1,793,193	+				-0.2
1,793,273	-				-0.1
1,793,309	+				+0.8
1,793,326	-				-1.3
1,793,331	+				-0.3
1,793,341	-				+2.3
1,793,345	+				-0.0
1,793,346	-				+0.0
1,793,346	-				+0.6
1,793,358	-				+0.0
1,793,383	-		MIT1002_01627	0.11	-1.2
1,793,420	+		MIT1002_01627	0.14	-0.4
1,793,493	+		MIT1002_01627	0.20	+0.5
1,793,504	+		MIT1002_01627	0.21	+1.3
1,793,516	+		MIT1002_01627	0.22	+1.6
1,793,627	+		MIT1002_01627	0.31	+1.5
1,793,627	+		MIT1002_01627	0.31	-0.3
1,793,627	+		MIT1002_01627	0.31	-0.6
1,793,627	+		MIT1002_01627	0.31	+1.5
1,793,627	+		MIT1002_01627	0.31	-0.5
1,793,627	+		MIT1002_01627	0.31	-1.5
1,793,627	+		MIT1002_01627	0.31	-0.5
1,793,627	+		MIT1002_01627	0.31	+1.0
1,793,635	-		MIT1002_01627	0.32	-0.6
1,793,635	-		MIT1002_01627	0.32	-1.1
1,793,635	-		MIT1002_01627	0.32	+0.0
1,793,635	-		MIT1002_01627	0.32	+1.2
1,793,640	+		MIT1002_01627	0.32	-0.4
1,793,661	+		MIT1002_01627	0.34	+0.9
1,793,667	+		MIT1002_01627	0.34	-0.6
1,793,672	+		MIT1002_01627	0.35	+1.3
1,793,674	+		MIT1002_01627	0.35	+0.6
1,793,674	+		MIT1002_01627	0.35	-1.9
1,793,684	+		MIT1002_01627	0.36	+0.6
1,793,696	+		MIT1002_01627	0.37	+0.0
1,793,696	+		MIT1002_01627	0.37	-0.3
1,793,704	-		MIT1002_01627	0.37	-0.7
1,793,721	+		MIT1002_01627	0.39	+2.0
1,793,768	+		MIT1002_01627	0.43	-1.0
1,793,770	+		MIT1002_01627	0.43	-0.9
1,793,770	+		MIT1002_01627	0.43	+0.5
1,793,776	-		MIT1002_01627	0.43	+0.2
1,793,786	+		MIT1002_01627	0.44	+0.2
1,793,794	-		MIT1002_01627	0.45	+0.3
1,793,817	+		MIT1002_01627	0.47	-0.7
1,793,825	-		MIT1002_01627	0.47	-0.4
1,793,846	+		MIT1002_01627	0.49	-0.1
1,793,854	-		MIT1002_01627	0.50	-1.6
1,793,878	+		MIT1002_01627	0.51	-0.2
1,793,885	+		MIT1002_01627	0.52	+0.3
1,793,933	+		MIT1002_01627	0.56	-0.6
1,793,935	-		MIT1002_01627	0.56	-0.3
1,793,941	-		MIT1002_01627	0.57	+1.3
1,793,941	-		MIT1002_01627	0.57	-0.3
1,793,951	-		MIT1002_01627	0.57	+1.6
1,793,975	+		MIT1002_01627	0.59	-1.3
1,793,987	-		MIT1002_01627	0.60	-2.0
1,794,182	-		MIT1002_01627	0.76	-0.3
1,794,217	+		MIT1002_01627	0.79	-1.1
1,794,225	-		MIT1002_01627	0.80	-0.3
1,794,227	+		MIT1002_01627	0.80	+0.2
1,794,227	+		MIT1002_01627	0.80	-1.5
1,794,235	-		MIT1002_01627	0.80	+1.8
1,794,279	+		MIT1002_01627	0.84	+1.6
1,794,304	+		MIT1002_01627	0.86	+0.1
1,794,388	+				+0.3
1,794,388	+				+0.4
1,794,419	-				+1.2
1,794,731	+		MIT1002_01628	0.15	-0.0
1,794,731	+		MIT1002_01628	0.15	-1.5
1,794,745	-		MIT1002_01628	0.17	-1.6
1,794,746	+		MIT1002_01628	0.17	-0.8
1,794,746	+		MIT1002_01628	0.17	+0.6
1,794,751	+		MIT1002_01628	0.18	+0.3
1,794,754	-		MIT1002_01628	0.19	-1.7
1,794,759	-		MIT1002_01628	0.19	+1.8
1,794,764	+		MIT1002_01628	0.20	-0.1
1,794,778	+		MIT1002_01628	0.22	+0.5
1,794,795	+		MIT1002_01628	0.25	-0.4
1,794,795	+		MIT1002_01628	0.25	-0.5
1,794,795	+		MIT1002_01628	0.25	+1.1
1,794,803	-		MIT1002_01628	0.26	-0.5
1,794,803	-		MIT1002_01628	0.26	-0.0
1,794,803	-		MIT1002_01628	0.26	-1.3
1,794,853	-		MIT1002_01628	0.34	+1.1
1,794,887	+		MIT1002_01628	0.39	-0.3
1,794,931	+		MIT1002_01628	0.46	-0.1
1,794,975	+		MIT1002_01628	0.52	+0.7
1,794,983	-		MIT1002_01628	0.53	-0.5
1,794,983	-		MIT1002_01628	0.53	-0.4
1,795,007	-		MIT1002_01628	0.57	+1.3
1,795,214	-		MIT1002_01628	0.89	-1.2
1,795,218	+		MIT1002_01628	0.89	+0.2
1,795,241	+				+0.5
1,795,241	+				+1.3
1,795,241	+				-2.6
1,795,242	+				+0.0
1,795,248	-				+1.3
1,795,249	-				+1.2
1,795,249	-				-0.6
1,795,250	+				-0.8
1,795,250	-				+1.9
1,795,250	-				+0.6
1,795,258	-				+0.8
1,795,258	-				-1.4
1,795,312	+				-0.1
1,795,312	+				+0.5
1,795,325	-				-2.0
1,795,340	+				+0.8
1,795,340	+				+1.0
1,795,351	+				-0.1
1,795,351	+				-1.1
1,795,351	+				+0.8
1,795,351	+				-0.1
1,795,351	+				+0.0
1,795,354	-				-0.3
1,795,354	-				+2.0
1,795,359	-				+0.3
1,795,359	-				-0.9
1,795,359	-				-0.5
1,795,388	+				+2.4
1,795,391	-				+1.0
1,795,395	-				+0.0
1,795,395	-				+0.8
1,795,429	+				+1.9
1,795,429	+				-1.4
1,795,430	+				+1.6
1,795,431	+				+2.0
1,795,431	+				-1.2
1,795,437	-				-0.7
1,795,437	-				-1.6
1,795,437	-				+0.7
1,795,438	-				+0.6
1,795,438	-				-0.8
1,795,438	-				+0.3
1,795,446	+				-0.1
1,795,453	-				-2.8
1,795,454	-				-0.2
1,795,454	-				-1.1
1,795,456	-				-0.8
1,795,459	+				+2.0
1,795,460	+				+0.5
1,795,460	+				+1.3
1,795,460	+				+0.7
1,795,460	+				+0.3
1,795,460	+				-0.1
1,795,460	+				+1.4
1,795,466	+				-1.5
1,795,468	-				+1.3
1,795,468	-				+0.4
1,795,468	-				-2.3
1,795,468	-				-0.2
1,795,468	-				-1.3
1,795,468	-				-0.8
1,795,468	-				+0.9
1,795,468	-				-1.0
1,795,468	-				+0.6
1,795,474	-				+0.5
1,795,474	-				-0.1
1,795,474	-				-1.4
1,795,476	+				+1.3