Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01555

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
1,707,571	+		MIT1002_01554	0.69	-0.9
1,707,571	+		MIT1002_01554	0.69	-0.2
1,707,579	-		MIT1002_01554	0.70	-0.1
1,707,587	-		MIT1002_01554	0.71	-1.2
1,707,589	+		MIT1002_01554	0.71	-1.9
1,707,656	-		MIT1002_01554	0.76	+0.6
1,707,669	+		MIT1002_01554	0.77	+0.5
1,707,669	+		MIT1002_01554	0.77	-0.6
1,707,669	+		MIT1002_01554	0.77	+1.1
1,707,669	+		MIT1002_01554	0.77	-2.3
1,707,669	+		MIT1002_01554	0.77	+0.5
1,707,669	+		MIT1002_01554	0.77	-1.0
1,707,669	+		MIT1002_01554	0.77	+1.7
1,707,669	+		MIT1002_01554	0.77	-1.3
1,707,669	+		MIT1002_01554	0.77	+0.3
1,707,677	-		MIT1002_01554	0.77	-1.5
1,707,677	-		MIT1002_01554	0.77	-1.3
1,707,708	-		MIT1002_01554	0.80	+0.9
1,707,727	+		MIT1002_01554	0.81	+0.4
1,707,727	+		MIT1002_01554	0.81	-0.1
1,707,735	-		MIT1002_01554	0.82	+0.2
1,707,770	+		MIT1002_01554	0.85	+0.8
1,707,788	+		MIT1002_01554	0.86	-2.1
1,707,801	-		MIT1002_01554	0.87	-1.9
1,707,830	+		MIT1002_01554	0.89	-0.0
1,707,830	+		MIT1002_01554	0.89	+0.1
1,707,846	-				-1.2
1,707,846	-				+0.9
1,707,846	-				+1.1
1,707,885	+				+12.9
1,708,001	+				-1.3
1,708,001	+				-1.2
1,708,087	+				-1.8
1,708,087	+				-0.1
1,708,087	+				-1.0
1,708,087	+				+0.1
1,708,087	+				-0.3
1,708,087	+				-0.3
1,708,087	+				-1.7
1,708,095	-				+0.7
1,708,095	-				-0.4
1,708,095	-				-1.1
1,708,095	-				-1.1
1,708,095	-				-1.4
1,708,099	+				+0.7
1,708,128	+				+0.2
1,708,136	+				-2.2
1,708,136	-				-1.4
1,708,215	+				+0.5
1,708,264	+				+0.9
1,708,273	-				-0.1
1,708,338	+				+1.7
1,708,338	+				+1.5
1,708,346	-				-1.0
1,708,346	-				-1.7
1,708,346	-				+0.1
1,708,346	-				-1.5
1,708,456	-		MIT1002_01555	0.21	+0.4
1,708,486	+		MIT1002_01555	0.28	+0.3
1,708,622	-		MIT1002_01555	0.60	-0.6
1,708,742	+		MIT1002_01555	0.88	+0.7
1,708,789	-				-0.9
1,708,817	+				-1.5
1,708,832	+				+0.2
1,708,958	+				-1.8
1,708,958	+				-1.4
1,708,958	+				-1.5
1,709,025	+				+1.0
1,709,127	+		MIT1002_01556	0.12	-0.1
1,709,127	+		MIT1002_01556	0.12	+1.2
1,709,135	-		MIT1002_01556	0.12	+0.7
1,709,135	-		MIT1002_01556	0.12	+0.1
1,709,135	-		MIT1002_01556	0.12	-2.1
1,709,139	+		MIT1002_01556	0.13	-2.3
1,709,226	+		MIT1002_01556	0.21	-2.1
1,709,234	-		MIT1002_01556	0.22	+1.1
1,709,308	-		MIT1002_01556	0.29	-0.2
1,709,328	+		MIT1002_01556	0.30	-2.8
1,709,381	+		MIT1002_01556	0.35	+0.9
1,709,494	-		MIT1002_01556	0.46	-0.2
1,709,494	-		MIT1002_01556	0.46	+0.7
1,709,494	-		MIT1002_01556	0.46	+0.6
1,709,597	-		MIT1002_01556	0.55	+0.8
1,709,609	-		MIT1002_01556	0.56	-0.2
1,709,668	-		MIT1002_01556	0.62	+1.7
1,709,727	-		MIT1002_01556	0.67	-0.4
1,709,754	+		MIT1002_01556	0.70	-1.8
1,709,757	-		MIT1002_01556	0.70	+1.8
1,709,760	+		MIT1002_01556	0.70	-0.5
1,709,766	+		MIT1002_01556	0.71	-0.9