Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01213

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
1,335,209	-		MIT1002_01212	0.41	-0.6
1,335,217	+		MIT1002_01212	0.42	+0.9
1,335,218	-		MIT1002_01212	0.42	-0.9
1,335,283	+		MIT1002_01212	0.49	+1.6
1,335,352	-		MIT1002_01212	0.57	+0.1
1,335,385	-		MIT1002_01212	0.60	-1.2
1,335,400	+		MIT1002_01212	0.62	-2.0
1,335,432	+		MIT1002_01212	0.65	+1.3
1,335,455	+		MIT1002_01212	0.68	-0.7
1,335,509	+		MIT1002_01212	0.74	-0.3
1,335,560	-		MIT1002_01212	0.80	-1.1
1,335,569	+		MIT1002_01212	0.81	+3.2
1,335,569	+		MIT1002_01212	0.81	-0.6
1,335,577	-		MIT1002_01212	0.81	+0.0
1,335,707	+				+0.9
1,335,707	+				+0.7
1,335,715	-				-0.1
1,335,715	-				+0.5
1,335,775	-				+2.2
1,335,779	+				+1.9
1,335,806	+				+0.2
1,335,806	+				+0.9
1,335,806	+				-0.1
1,335,814	-				+2.3
1,335,814	-				+1.5
1,335,814	-				+2.2
1,335,814	-				+0.5
1,335,836	-				+0.3
1,335,836	-				-0.1
1,336,022	-				-0.8
1,336,133	-				-0.2
1,336,170	+				-1.3
1,336,177	+				+1.3
1,336,182	+				+1.3
1,336,203	-				-0.9
1,336,269	+				-0.6
1,336,274	-				-0.7
1,336,276	+				-1.4
1,336,329	-		MIT1002_01213	0.13	+0.4
1,336,372	+		MIT1002_01213	0.17	-0.5
1,336,378	+		MIT1002_01213	0.18	-0.1
1,336,380	-		MIT1002_01213	0.18	-0.6
1,336,380	-		MIT1002_01213	0.18	-0.1
1,336,381	-		MIT1002_01213	0.18	+1.3
1,336,387	-		MIT1002_01213	0.18	-1.8
1,336,463	+		MIT1002_01213	0.25	-2.3
1,336,463	+		MIT1002_01213	0.25	+0.8
1,336,471	-		MIT1002_01213	0.26	-0.4
1,336,588	+		MIT1002_01213	0.37	+3.0
1,336,613	+		MIT1002_01213	0.39	-0.2
1,336,613	+		MIT1002_01213	0.39	+0.5
1,336,613	+		MIT1002_01213	0.39	+0.3
1,336,621	-		MIT1002_01213	0.40	-1.2
1,336,804	-		MIT1002_01213	0.57	+1.1
1,336,834	-		MIT1002_01213	0.60	-0.4
1,336,842	-		MIT1002_01213	0.60	+1.8
1,336,859	+		MIT1002_01213	0.62	+0.8
1,336,874	-		MIT1002_01213	0.63	-0.2
1,337,006	-		MIT1002_01213	0.75	-0.5
1,337,006	-		MIT1002_01213	0.75	-1.0
1,337,068	-		MIT1002_01213	0.81	-2.2
1,337,111	+		MIT1002_01213	0.85	+3.5
1,337,165	+				+0.9
1,337,173	-				-2.0
1,337,187	+				-1.9
1,337,242	+				-1.6
1,337,242	+				-1.0
1,337,242	+				-0.0
1,337,242	+				+0.1
1,337,242	+				-1.0
1,337,242	+				+1.5
1,337,242	+				+0.3
1,337,242	+				-1.1
1,337,242	+				+1.3
1,337,250	-				+0.1
1,337,250	-				+0.5
1,337,250	-				-0.5
1,337,250	-				-0.9
1,337,250	-				+1.0
1,337,364	+				-0.2
1,337,444	-				+0.4
1,337,444	-				-0.4
1,337,446	-				-2.2
1,337,446	-				-0.3
1,337,483	+				+0.9
1,337,502	+				+0.8
1,337,601	+		MIT1002_01214	0.47	-0.9
1,337,644	+		MIT1002_01214	0.66	+1.1
1,337,751	+				-0.4
1,337,751	+				-0.1
1,337,790	-				+2.1
1,337,797	+				+1.8
1,337,797	+				-2.6
1,337,797	+				+0.6
1,337,805	-				-1.5
1,337,837	+				+0.6
1,337,837	+				+0.6
1,337,837	+				+0.4
1,337,837	+				-0.1
1,337,837	+				-0.0
1,337,837	+				+0.5
1,337,845	-				+1.1
1,337,845	-				-1.0
1,337,845	-				+0.0
1,337,845	-				-0.6
1,337,845	-				-1.6
1,337,845	-				-0.9
1,337,845	-				+0.3
1,337,845	-				-1.2
1,337,859	-				+0.8
1,337,870	+				-0.3
1,337,904	-				+3.5