Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01093

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
1,201,689	-		MIT1002_01092	0.13	+1.6
1,201,698	+		MIT1002_01092	0.13	-1.7
1,201,707	-		MIT1002_01092	0.14	-0.8
1,201,739	+		MIT1002_01092	0.17	-1.4
1,201,768	+		MIT1002_01092	0.20	-0.3
1,201,887	-		MIT1002_01092	0.31	-0.6
1,201,897	+		MIT1002_01092	0.32	+2.6
1,201,902	+		MIT1002_01092	0.33	-1.0
1,202,007	+		MIT1002_01092	0.43	+0.6
1,202,015	-		MIT1002_01092	0.43	-0.5
1,202,061	-		MIT1002_01092	0.48	+0.8
1,202,109	-		MIT1002_01092	0.52	+0.9
1,202,124	+		MIT1002_01092	0.54	+1.1
1,202,219	-		MIT1002_01092	0.63	+1.6
1,202,239	+		MIT1002_01092	0.64	-0.4
1,202,317	+		MIT1002_01092	0.72	+1.9
1,202,325	-		MIT1002_01092	0.73	-0.5
1,202,380	+		MIT1002_01092	0.78	-0.9
1,202,380	+		MIT1002_01092	0.78	+0.2
1,202,388	-		MIT1002_01092	0.79	+1.1
1,202,448	-		MIT1002_01092	0.84	-1.4
1,202,540	-				+0.1
1,202,616	+				-0.3
1,202,621	+				+0.1
1,202,624	-				+1.2
1,202,624	-				-0.8
1,202,624	-				+0.1
1,202,626	-				-0.7
1,202,635	+				-2.0
1,202,635	+				-2.1
1,202,677	-		MIT1002_01093	0.11	-0.3
1,202,692	-		MIT1002_01093	0.15	-0.7
1,202,695	+		MIT1002_01093	0.15	+0.6
1,202,703	-		MIT1002_01093	0.17	+0.3
1,202,797	+		MIT1002_01093	0.40	+0.2
1,202,868	-		MIT1002_01093	0.58	-1.3
1,202,887	-		MIT1002_01093	0.62	+0.2
1,202,898	-		MIT1002_01093	0.65	-0.3
1,203,190	+		MIT1002_01094	0.27	+0.2
1,203,198	-		MIT1002_01094	0.29	-0.6
1,203,198	-		MIT1002_01094	0.29	+0.3
1,203,198	-		MIT1002_01094	0.29	+0.0
1,203,198	-		MIT1002_01094	0.29	-0.6
1,203,207	+		MIT1002_01094	0.31	-2.2
1,203,255	+		MIT1002_01094	0.41	+1.8
1,203,308	-		MIT1002_01094	0.53	+1.7
1,203,386	+		MIT1002_01094	0.70	-0.7
1,203,574	+				+1.6
1,203,611	-		MIT1002_01095	0.13	-0.4
1,203,645	-		MIT1002_01095	0.17	-1.2
1,203,665	-		MIT1002_01095	0.20	-0.5
1,203,676	+		MIT1002_01095	0.22	+0.5
1,203,676	+		MIT1002_01095	0.22	-0.7
1,203,731	-		MIT1002_01095	0.29	+0.0
1,203,856	+		MIT1002_01095	0.45	-1.6
1,203,858	+		MIT1002_01095	0.46	-0.9
1,203,866	-		MIT1002_01095	0.47	-0.5
1,203,866	-		MIT1002_01095	0.47	-1.5
1,203,897	-		MIT1002_01095	0.51	+0.9
1,203,906	-		MIT1002_01095	0.52	-1.4
1,203,906	-		MIT1002_01095	0.52	+0.8
1,203,906	-		MIT1002_01095	0.52	-1.1
1,203,916	-		MIT1002_01095	0.53	+0.3
1,203,959	-		MIT1002_01095	0.59	-2.1
1,203,967	+		MIT1002_01095	0.60	+1.5