Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01041

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
1,149,971	-				+2.7
1,150,413	-				+2.8
1,150,475	+		MIT1002_01040	0.14	-0.2
1,150,475	+		MIT1002_01040	0.14	+2.3
1,150,483	-		MIT1002_01040	0.16	+2.8
1,150,579	-		MIT1002_01040	0.39	+2.2
1,150,595	+		MIT1002_01040	0.42	+1.6
1,150,611	-		MIT1002_01040	0.46	+0.2
1,150,644	-		MIT1002_01040	0.54	+2.1
1,150,658	+		MIT1002_01040	0.57	+2.9
1,150,728	-		MIT1002_01040	0.74	+0.4
1,150,789	+		MIT1002_01040	0.88	+0.9
1,150,789	+		MIT1002_01040	0.88	+1.6
1,150,833	-				+0.7
1,150,858	+				+1.8
1,150,860	+				+3.3
1,150,860	+				+1.6
1,150,868	-				+1.5
1,150,881	+				+2.0
1,150,893	+				+1.7
1,150,911	-				+0.7
1,150,916	-				+2.1
1,151,015	-		MIT1002_01041	0.21	+1.2
1,151,040	-		MIT1002_01041	0.25	+0.3
1,151,052	-		MIT1002_01041	0.26	+0.5
1,151,083	-		MIT1002_01041	0.31	+0.4
1,151,121	-		MIT1002_01041	0.37	+1.4
1,151,121	-		MIT1002_01041	0.37	+1.4
1,151,121	-		MIT1002_01041	0.37	+1.4
1,151,121	-		MIT1002_01041	0.37	+3.1
1,151,266	+		MIT1002_01041	0.58	+2.6
1,151,369	+		MIT1002_01041	0.73	+1.6
1,151,370	+		MIT1002_01041	0.73	+2.0
1,151,381	+		MIT1002_01041	0.74	+2.0
1,151,519	+				+1.0
1,151,527	-				+2.3
1,151,547	-				+0.2
1,151,581	+				-0.5
1,151,648	+				+2.3
1,151,648	+				+0.9
1,151,711	+		MIT1002_01042	0.10	+3.1
1,151,793	-		MIT1002_01042	0.16	+1.0
1,151,845	-		MIT1002_01042	0.20	+0.4
1,151,887	-		MIT1002_01042	0.23	-0.1
1,151,894	+		MIT1002_01042	0.23	+1.5
1,151,897	-		MIT1002_01042	0.24	+1.4
1,151,950	-		MIT1002_01042	0.27	+1.1
1,152,003	-		MIT1002_01042	0.31	+0.1
1,152,003	-		MIT1002_01042	0.31	-0.4
1,152,046	+		MIT1002_01042	0.34	+0.6
1,152,115	+		MIT1002_01042	0.39	+0.4
1,152,183	+		MIT1002_01042	0.44	+0.2
1,152,191	+		MIT1002_01042	0.45	+1.3
1,152,302	+		MIT1002_01042	0.53	+0.6
1,152,310	-		MIT1002_01042	0.53	-0.5
1,152,339	+		MIT1002_01042	0.55	+1.4
1,152,386	-		MIT1002_01042	0.59	-0.8
1,152,483	-		MIT1002_01042	0.66	+0.4