Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01032

Experiment: monoculture; Experiment B, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 6
1,143,009	+				+0.5
1,143,046	-				+2.1
1,143,066	+				+1.0
1,143,074	-				-2.0
1,143,074	-				-0.1
1,143,074	-				+2.1
1,143,076	+				-0.2
1,143,082	-				-0.1
1,143,082	-				+1.1
1,143,097	-				+0.9
1,143,097	-				-1.2
1,143,201	+		MIT1002_01030	0.23	-1.2
1,143,207	-		MIT1002_01030	0.28	+0.1
1,143,209	-		MIT1002_01030	0.29	+0.8
1,143,327	-				+0.9
1,143,465	-		MIT1002_01031	0.47	+0.5
1,143,466	-		MIT1002_01031	0.48	-0.3
1,143,466	-		MIT1002_01031	0.48	+0.3
1,143,471	-		MIT1002_01031	0.55	+1.9
1,143,475	+		MIT1002_01031	0.60	+0.5
1,143,483	-		MIT1002_01031	0.71	+1.7
1,143,502	+				-0.3
1,143,575	-				+1.3
1,143,625	-				+0.3
1,143,735	+				+1.0
1,143,942	-				+1.9
1,144,062	-				-2.3
1,144,105	+				+0.8
1,144,282	-		MIT1002_01032	0.25	+2.1
1,144,407	-		MIT1002_01032	0.35	+0.6
1,144,430	-		MIT1002_01032	0.37	+1.3
1,144,507	+		MIT1002_01032	0.44	-0.2
1,144,540	+		MIT1002_01032	0.47	+0.7
1,144,559	+		MIT1002_01032	0.48	-0.6
1,144,569	-		MIT1002_01032	0.49	-0.4
1,144,669	+		MIT1002_01032	0.57	-0.1
1,144,683	-		MIT1002_01032	0.59	-0.4
1,144,717	+		MIT1002_01032	0.62	-0.4
1,144,717	+		MIT1002_01032	0.62	+2.7
1,144,717	+		MIT1002_01032	0.62	+3.6
1,144,717	+		MIT1002_01032	0.62	+0.2
1,144,725	-		MIT1002_01032	0.62	-0.3
1,144,725	-		MIT1002_01032	0.62	-0.5
1,144,725	-		MIT1002_01032	0.62	-1.0
1,144,725	-		MIT1002_01032	0.62	-1.4
1,144,727	+		MIT1002_01032	0.62	+0.8
1,144,734	-		MIT1002_01032	0.63	+1.1
1,144,741	+		MIT1002_01032	0.64	+1.2
1,144,749	-		MIT1002_01032	0.64	-0.6
1,144,749	-		MIT1002_01032	0.64	+0.8
1,144,758	-		MIT1002_01032	0.65	+0.8
1,144,758	-		MIT1002_01032	0.65	-0.5
1,144,881	-		MIT1002_01032	0.75	+0.1
1,144,998	+		MIT1002_01032	0.85	+0.6
1,145,057	-				+2.9
1,145,126	-				+0.8
1,145,128	-				-0.1
1,145,179	+				+0.3
1,145,201	+				-1.0
1,145,206	+				-0.4
1,145,322	+				+0.3
1,145,322	+				+1.8
1,145,354	-				-1.7
1,145,370	+				-0.4
1,145,395	+				-1.7
1,145,420	-				-1.4
1,145,616	+		MIT1002_01033	0.30	+0.4
1,145,624	-		MIT1002_01033	0.31	-0.1
1,145,707	+		MIT1002_01033	0.48	-1.0
1,145,764	-		MIT1002_01033	0.60	+1.9
1,145,772	+		MIT1002_01033	0.62	-0.6
1,145,780	-		MIT1002_01033	0.63	-1.0
1,145,780	-		MIT1002_01033	0.63	+0.1
1,145,780	-		MIT1002_01033	0.63	-1.4
1,145,797	+		MIT1002_01033	0.67	+0.5
1,145,800	+		MIT1002_01033	0.67	-0.8
1,145,808	-		MIT1002_01033	0.69	+0.7
1,145,810	-		MIT1002_01033	0.70	+2.8
1,145,910	-				+0.2
1,146,001	+				+0.8
1,146,052	+				+1.0
1,146,053	+				-0.9
1,146,062	+				+0.1
1,146,083	-				-1.8
1,146,083	-				-0.4