Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04226

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
93,605	+				+0.1
93,618	-				-0.0
93,633	-				-0.2
93,658	+				-0.9
93,727	-				+0.9
93,727	-				-1.0
93,747	+				-2.7
93,757	+				+0.5
93,759	-				-1.1
93,759	-				+1.7
93,762	+				-0.5
93,762	+				+2.4
93,762	+				-1.0
93,765	-				-1.1
93,772	+				-0.0
93,840	+				+0.5
93,846	-				-0.7
93,846	-				-0.1
93,848	-				-1.0
93,858	-				-0.4
93,871	+				-0.6
93,879	-				-2.8
93,879	-				-0.4
93,879	-				-1.9
93,906	+				+0.4
93,906	+				+1.7
93,906	+				+0.6
93,906	+				+2.0
93,906	+				-0.3
93,906	+				-0.1
93,906	+				-0.2
93,906	+				-0.9
93,906	+				-0.3
93,906	+				+0.9
93,906	+				-0.8
93,906	+				+0.7
93,906	+				-1.4
93,906	+				-0.3
93,906	+				-0.0
93,906	+				-0.6
93,906	+				-0.6
93,906	+				+0.7
93,906	+				+0.2
93,911	+				-0.2
93,914	-				+0.3
93,914	-				-1.2
93,914	-				-1.5
93,914	-				-0.1
93,914	-				-1.4
93,914	-				+1.4
93,914	-				-0.3
93,914	-				-2.0
93,914	-				-0.4
93,914	-				-0.5
93,914	-				+0.3
93,914	-				-0.3
93,914	-				-0.2
93,914	-				-0.0
93,914	-				+0.5
93,914	-				+0.6
93,914	-				-0.7
93,914	-				-0.5
93,914	-				-0.1
93,914	-				+0.9
93,914	-				-0.3
93,914	-				-0.2
93,942	+				+0.5
93,950	-				-0.4
93,950	-				+0.1
93,950	-				-0.2
93,950	-				+0.5
93,951	+				-1.3
93,951	+				-0.9
93,957	-				-0.5
93,959	-				-0.8
93,959	-				-0.0
93,995	+				-0.0
93,995	+				-0.6
93,995	+				-0.7
94,003	-				+0.8
94,003	-				-1.0
94,003	-				-0.6
94,003	-				-0.6
94,078	+				+0.8
94,087	-				+1.4
94,087	-				+0.7
94,094	+				+0.0
94,133	+				+0.2
94,133	+				-0.4
94,133	+				+1.5
94,141	+				-0.4
94,141	-				-0.3
94,141	-				+1.2
94,143	+				+0.1
94,147	+				-0.1
94,151	-				+0.1
94,196	+				-0.1
94,211	+				+0.3
94,286	-				-0.7
94,288	-				+0.2
94,288	-				+0.9
94,288	-				-2.1
94,292	+				+0.0
94,299	+				-1.7
94,309	-				-1.7
94,309	-				-0.0
94,320	-				-0.2
94,330	-				-0.1
94,473	+				-0.7
94,481	-				-1.9
94,534	+				-0.7
94,543	-				-0.1
94,550	+				-0.1
94,550	+				+0.3
94,558	-				+1.2
94,558	-				-2.1
94,564	-				+0.2
94,565	+				-2.8
94,566	-				+0.8
94,571	+				+0.3
94,581	+				-0.0
94,589	-				-1.2
94,589	-				-0.9
94,589	-				+0.9
94,599	-				+1.4
94,687	+		MIT1002_04226	0.22	+0.7
94,687	+		MIT1002_04226	0.22	-0.3
94,687	+		MIT1002_04226	0.22	-0.6
94,687	+		MIT1002_04226	0.22	-0.8
94,687	+		MIT1002_04226	0.22	+0.2
94,695	-		MIT1002_04226	0.24	+1.0
94,695	-		MIT1002_04226	0.24	+0.4
94,695	-		MIT1002_04226	0.24	+0.3
94,695	-		MIT1002_04226	0.24	-0.5
94,707	-		MIT1002_04226	0.27	+0.6
94,723	+		MIT1002_04226	0.31	-0.4
94,731	-		MIT1002_04226	0.33	+0.5
94,733	+		MIT1002_04226	0.33	-0.6
94,746	-		MIT1002_04226	0.36	+0.6
94,752	-		MIT1002_04226	0.38	+0.2
94,801	+		MIT1002_04226	0.50	-1.3
94,801	+		MIT1002_04226	0.50	+1.0
94,872	+		MIT1002_04226	0.67	-0.7
94,872	+		MIT1002_04226	0.67	-0.5
94,872	+		MIT1002_04226	0.67	-0.8
94,874	-		MIT1002_04226	0.67	-1.6
94,880	-		MIT1002_04226	0.69	-0.6
94,935	-		MIT1002_04226	0.82	-0.4
94,943	-		MIT1002_04226	0.84	-0.3
94,943	-		MIT1002_04226	0.84	-0.7
94,945	+		MIT1002_04226	0.85	+0.8
94,981	+				-0.5
94,981	-				-1.2
94,986	+				+0.4
94,989	-				+0.8
94,994	-				-0.0
94,996	+				+0.2
95,024	+				-0.6
95,024	+				+1.8
95,024	-				-0.1
95,032	-				+0.0
95,043	-				+0.3
95,057	+				-0.1
95,190	+				-1.5
95,190	+				+0.1
95,193	-				-0.5
95,198	-				+0.8
95,198	-				+1.3
95,198	-				-0.5
95,198	-				-0.8
95,198	-				+0.9
95,235	+				-0.4
95,243	-				+0.7
95,252	-				+0.9
95,271	+				-0.4
95,271	+				+0.9
95,271	+				-1.2
95,271	+				+0.3
95,272	-				-0.6
95,277	-				-0.7
95,279	-				-1.2
95,279	-				-0.7
95,344	-				-0.4
95,346	-				-0.5
95,372	+				-0.4
95,406	-				+1.3
95,448	-				+0.9
95,472	+				+1.5
95,472	+				+0.7
95,472	+				-0.7
95,472	+				+0.9
95,479	+				+0.8
95,479	-				+0.0
95,532	-		MIT1002_04227	0.17	+0.3
95,541	+		MIT1002_04227	0.18	-0.5
95,545	+		MIT1002_04227	0.18	-1.6
95,549	-		MIT1002_04227	0.19	+1.7
95,583	-		MIT1002_04227	0.23	+1.9
95,583	-		MIT1002_04227	0.23	-3.7
95,588	+		MIT1002_04227	0.24	+0.8
95,588	+		MIT1002_04227	0.24	-0.3
95,588	+		MIT1002_04227	0.24	+0.3
95,596	-		MIT1002_04227	0.25	-1.0
95,596	-		MIT1002_04227	0.25	-0.8
95,596	-		MIT1002_04227	0.25	+1.6
95,596	-		MIT1002_04227	0.25	-0.6
95,596	-		MIT1002_04227	0.25	+0.3
95,596	-		MIT1002_04227	0.25	+0.6
95,596	-		MIT1002_04227	0.25	+0.5
95,596	-		MIT1002_04227	0.25	+0.9
95,596	-		MIT1002_04227	0.25	+0.3
95,613	+		MIT1002_04227	0.27	+0.5
95,621	+		MIT1002_04227	0.28	-2.2
95,637	-		MIT1002_04227	0.30	+0.7
95,647	-		MIT1002_04227	0.32	-0.3
95,648	-		MIT1002_04227	0.32	+0.0
95,668	+		MIT1002_04227	0.34	+1.9
95,676	+		MIT1002_04227	0.35	+0.4
95,682	-		MIT1002_04227	0.36	+1.2
95,682	-		MIT1002_04227	0.36	-1.1
95,682	-		MIT1002_04227	0.36	+0.0
95,684	-		MIT1002_04227	0.36	-0.7
95,684	-		MIT1002_04227	0.36	+0.8
95,708	-		MIT1002_04227	0.39	-1.0
95,710	-		MIT1002_04227	0.40	-0.6
95,710	-		MIT1002_04227	0.40	+0.1
95,788	+		MIT1002_04227	0.50	-0.5
95,788	+		MIT1002_04227	0.50	-0.7
95,788	+		MIT1002_04227	0.50	+0.6
95,788	-		MIT1002_04227	0.50	-0.7
95,851	+		MIT1002_04227	0.58	+1.2
95,884	+		MIT1002_04227	0.62	-1.7
95,975	-		MIT1002_04227	0.74	+0.3