Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04005

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,491,207	-		MIT1002_04003	0.52	-0.5
4,491,222	+		MIT1002_04003	0.53	+0.5
4,491,244	+		MIT1002_04003	0.55	-0.8
4,491,335	+		MIT1002_04003	0.63	-0.4
4,491,394	+		MIT1002_04003	0.69	-0.9
4,491,406	+		MIT1002_04003	0.70	+0.5
4,491,445	-		MIT1002_04003	0.73	+0.5
4,491,467	-		MIT1002_04003	0.75	-1.0
4,491,485	+		MIT1002_04003	0.77	+0.7
4,491,572	+		MIT1002_04003	0.85	-0.8
4,491,580	-		MIT1002_04003	0.85	+0.1
4,491,690	+				-2.5
4,491,703	-				-1.2
4,491,766	+				-1.4
4,491,782	-		MIT1002_04004	0.11	+0.3
4,491,790	+		MIT1002_04004	0.16	+0.7
4,491,796	-		MIT1002_04004	0.20	+0.6
4,491,818	-		MIT1002_04004	0.34	-0.7
4,491,818	-		MIT1002_04004	0.34	-0.7
4,491,866	+		MIT1002_04004	0.64	-0.9
4,491,866	+		MIT1002_04004	0.64	-0.0
4,491,874	-		MIT1002_04004	0.69	-1.9
4,492,025	+				+0.6
4,492,038	-				+0.9
4,492,085	-				+1.7
4,492,098	-				+0.5
4,492,098	-				-0.4
4,492,110	-				+0.2
4,492,160	+				-1.1
4,492,160	+				+1.0
4,492,168	+				+0.6
4,492,246	+		MIT1002_04005	0.16	-0.7
4,492,285	-		MIT1002_04005	0.32	-0.8
4,492,349	+		MIT1002_04005	0.57	+0.3
4,492,349	+		MIT1002_04005	0.57	+1.3
4,492,349	+		MIT1002_04005	0.57	+1.1
4,492,349	+		MIT1002_04005	0.57	-0.9
4,492,349	+		MIT1002_04005	0.57	+1.9
4,492,357	-		MIT1002_04005	0.61	+1.0
4,492,362	-		MIT1002_04005	0.63	+0.4
4,492,396	+		MIT1002_04005	0.76	+0.3
4,492,493	+				-0.5
4,492,501	-				-0.5
4,492,558	-				+0.3
4,492,563	-		MIT1002_04006	0.10	-1.2
4,492,693	-		MIT1002_04006	0.23	-0.6
4,492,746	+		MIT1002_04006	0.29	-1.7
4,492,751	+		MIT1002_04006	0.29	-0.1
4,492,848	-		MIT1002_04006	0.39	+0.5
4,492,853	-		MIT1002_04006	0.40	-1.9
4,492,894	+		MIT1002_04006	0.44	+0.4
4,492,948	-		MIT1002_04006	0.49	-1.2
4,492,956	-		MIT1002_04006	0.50	-0.9
4,493,015	-		MIT1002_04006	0.56	-2.6
4,493,066	+		MIT1002_04006	0.62	-0.6
4,493,087	+		MIT1002_04006	0.64	-0.2
4,493,170	-		MIT1002_04006	0.72	+0.4
4,493,179	+		MIT1002_04006	0.73	+1.4
4,493,179	+		MIT1002_04006	0.73	+1.5
4,493,187	-		MIT1002_04006	0.74	+0.3
4,493,189	+		MIT1002_04006	0.74	+0.5
4,493,212	-		MIT1002_04006	0.76	+1.1
4,493,234	-		MIT1002_04006	0.79	+0.0
4,493,240	+		MIT1002_04006	0.79	+0.6
4,493,242	+		MIT1002_04006	0.80	+0.4
4,493,376	+				-0.3
4,493,376	+				-0.5
4,493,376	+				+0.2
4,493,382	-				+0.4
4,493,384	-				-1.3
4,493,389	-				-0.2
4,493,418	+				-1.4
4,493,426	-				-0.5
4,493,436	-				+0.2
4,493,436	-				+1.8