Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03931

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,406,319	+				-1.5
4,406,320	+				+0.5
4,406,327	-				-0.2
4,406,343	+				-0.2
4,406,351	-				-1.1
4,406,405	+				-0.3
4,406,415	-				+1.9
4,406,540	-		MIT1002_03930	0.38	-0.4
4,406,664	+		MIT1002_03930	0.69	+0.1
4,406,669	+		MIT1002_03930	0.70	-0.4
4,406,683	+		MIT1002_03930	0.74	+0.2
4,406,698	+		MIT1002_03930	0.77	-2.0
4,406,706	-		MIT1002_03930	0.79	+1.5
4,406,711	-		MIT1002_03930	0.80	+1.3
4,406,722	+		MIT1002_03930	0.83	+1.0
4,406,786	+				+0.3
4,406,786	+				-0.2
4,406,796	+				+0.4
4,406,826	+				+0.7
4,406,826	+				+1.8
4,407,011	+				+0.7
4,407,051	+				-3.0
4,407,059	-				+0.1
4,407,143	+				+0.2
4,407,158	-				-1.2
4,407,277	+				+0.4
4,407,285	-				+0.5
4,407,337	-				+0.9
4,407,359	-				-0.9
4,407,379	+				+1.1
4,407,423	-		MIT1002_03931	0.16	+1.9
4,407,438	-		MIT1002_03931	0.18	+1.2
4,407,438	-		MIT1002_03931	0.18	+0.7
4,407,456	-		MIT1002_03931	0.20	+0.8
4,407,458	+		MIT1002_03931	0.20	-0.2
4,407,524	+		MIT1002_03931	0.29	+0.3
4,407,532	-		MIT1002_03931	0.30	-0.4
4,407,547	-		MIT1002_03931	0.32	+1.6
4,407,566	-		MIT1002_03931	0.35	+0.6
4,407,580	+		MIT1002_03931	0.37	+0.1
4,407,587	-		MIT1002_03931	0.38	-0.6
4,407,624	-		MIT1002_03931	0.43	-0.8
4,407,729	+		MIT1002_03931	0.57	+1.2
4,407,773	+		MIT1002_03931	0.63	-0.8
4,407,862	-		MIT1002_03931	0.75	+0.1
4,407,864	+		MIT1002_03931	0.75	-0.3
4,407,869	+		MIT1002_03931	0.76	+0.1
4,407,869	+		MIT1002_03931	0.76	-0.3
4,407,869	+		MIT1002_03931	0.76	-0.3
4,407,872	-		MIT1002_03931	0.76	+2.5
4,407,877	-		MIT1002_03931	0.77	-0.5
4,407,877	-		MIT1002_03931	0.77	-0.7
4,407,877	-		MIT1002_03931	0.77	+1.7
4,407,886	+		MIT1002_03931	0.78	+0.2
4,407,957	+		MIT1002_03931	0.87	-0.1
4,407,974	-		MIT1002_03931	0.90	-0.2
4,408,019	+				-0.4
4,408,027	-				-1.0
4,408,103	+				-1.7
4,408,140	+				-0.6
4,408,260	+		MIT1002_03932	0.16	-0.2
4,408,262	-		MIT1002_03932	0.16	+0.1
4,408,272	-		MIT1002_03932	0.17	-1.5
4,408,296	-		MIT1002_03932	0.19	-0.4
4,408,345	+		MIT1002_03932	0.22	+3.4
4,408,561	+		MIT1002_03932	0.39	+2.4
4,408,561	+		MIT1002_03932	0.39	+3.3
4,408,569	+		MIT1002_03932	0.39	+0.1
4,408,577	-		MIT1002_03932	0.40	-1.8
4,408,601	-		MIT1002_03932	0.42	-1.6
4,408,621	-		MIT1002_03932	0.43	+0.2
4,408,621	-		MIT1002_03932	0.43	+0.2
4,408,696	+		MIT1002_03932	0.49	+0.1
4,408,709	+		MIT1002_03932	0.50	-1.7
4,408,717	-		MIT1002_03932	0.50	+1.7
4,408,717	-		MIT1002_03932	0.50	-0.6
4,408,733	+		MIT1002_03932	0.52	+1.8
4,408,738	+		MIT1002_03932	0.52	+1.5
4,408,738	+		MIT1002_03932	0.52	-0.9
4,408,927	-		MIT1002_03932	0.66	-0.1
4,408,949	-		MIT1002_03932	0.68	+2.1
4,408,994	-		MIT1002_03932	0.71	-2.0
4,409,043	+		MIT1002_03932	0.75	-0.4