Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03760

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,200,874	+				-2.6
4,200,925	-				-1.3
4,200,969	-				-0.8
4,201,054	-		MIT1002_03759	0.20	-0.7
4,201,123	-		MIT1002_03759	0.29	+1.1
4,201,135	-		MIT1002_03759	0.31	+0.2
4,201,146	+		MIT1002_03759	0.33	+2.1
4,201,146	-		MIT1002_03759	0.33	+0.8
4,201,226	-		MIT1002_03759	0.44	-0.5
4,201,262	+		MIT1002_03759	0.49	-0.4
4,201,344	+		MIT1002_03759	0.61	+0.9
4,201,371	+		MIT1002_03759	0.64	-0.2
4,201,374	-		MIT1002_03759	0.65	+0.3
4,201,438	+		MIT1002_03759	0.74	+1.0
4,201,465	-		MIT1002_03759	0.78	-0.1
4,201,545	+		MIT1002_03759	0.89	+0.5
4,201,579	-				-0.9
4,201,589	-				-0.5
4,201,589	-				-0.1
4,201,589	-				+1.1
4,201,595	+				+0.6
4,201,596	-				-0.7
4,201,603	-				-0.3
4,201,618	+				+1.1
4,201,618	+				-0.6
4,201,712	-				+0.3
4,201,718	-				+1.3
4,201,779	-				-0.1
4,201,855	+				+0.5
4,201,855	+				-0.4
4,201,884	-		MIT1002_03760	0.11	-0.8
4,201,886	+		MIT1002_03760	0.11	+0.8
4,201,886	+		MIT1002_03760	0.11	-0.1
4,201,932	-		MIT1002_03760	0.15	+0.1
4,201,955	-		MIT1002_03760	0.17	-2.5
4,202,041	+		MIT1002_03760	0.25	-0.6
4,202,123	-		MIT1002_03760	0.33	-1.2
4,202,174	-		MIT1002_03760	0.38	-1.3
4,202,174	-		MIT1002_03760	0.38	+0.3
4,202,174	-		MIT1002_03760	0.38	-1.3
4,202,241	+		MIT1002_03760	0.44	+0.0
4,202,246	+		MIT1002_03760	0.45	+1.6
4,202,246	-		MIT1002_03760	0.45	+1.1
4,202,264	-		MIT1002_03760	0.46	-2.7
4,202,264	-		MIT1002_03760	0.46	+1.1
4,202,270	-		MIT1002_03760	0.47	+0.9
4,202,281	+		MIT1002_03760	0.48	-1.8
4,202,289	+		MIT1002_03760	0.49	+0.3
4,202,290	-		MIT1002_03760	0.49	+0.3
4,202,399	+		MIT1002_03760	0.59	+2.5
4,202,426	-		MIT1002_03760	0.62	-1.0
4,202,451	-		MIT1002_03760	0.64	+0.5
4,202,451	-		MIT1002_03760	0.64	-0.6
4,202,504	+		MIT1002_03760	0.69	-1.1
4,202,504	+		MIT1002_03760	0.69	-0.3
4,202,504	+		MIT1002_03760	0.69	+1.3
4,202,504	+		MIT1002_03760	0.69	-1.0
4,202,512	-		MIT1002_03760	0.70	+0.2
4,202,512	-		MIT1002_03760	0.70	-0.1
4,202,512	-		MIT1002_03760	0.70	-0.9
4,202,512	-		MIT1002_03760	0.70	-0.7
4,202,512	-		MIT1002_03760	0.70	+2.1
4,202,512	-		MIT1002_03760	0.70	+0.9
4,202,552	-		MIT1002_03760	0.73	-1.7
4,202,676	-		MIT1002_03760	0.85	+0.2
4,202,736	-				+0.8
4,202,836	+				-0.2
4,202,858	-				+0.5
4,202,858	-				-0.8
4,202,957	+		MIT1002_03761	0.15	+0.3
4,202,962	+		MIT1002_03761	0.16	+0.5
4,202,970	-		MIT1002_03761	0.17	-0.7
4,202,970	-		MIT1002_03761	0.17	+0.6
4,203,108	+		MIT1002_03761	0.32	+0.3
4,203,134	+		MIT1002_03761	0.35	-2.4
4,203,280	+		MIT1002_03761	0.51	-0.7
4,203,293	+		MIT1002_03761	0.53	-1.0
4,203,357	-		MIT1002_03761	0.60	+1.2
4,203,412	-		MIT1002_03761	0.66	-0.7
4,203,422	-		MIT1002_03761	0.67	+1.0
4,203,436	+		MIT1002_03761	0.69	-1.7
4,203,436	+		MIT1002_03761	0.69	-0.1
4,203,454	-		MIT1002_03761	0.71	+0.1
4,203,533	+		MIT1002_03761	0.80	+2.8
4,203,549	-		MIT1002_03761	0.81	-1.3
4,203,589	+		MIT1002_03761	0.86	-0.7
4,203,635	-				+1.1
4,203,637	+				+0.7
4,203,637	+				+1.3
4,203,646	+				+0.2
4,203,695	+				-1.3
4,203,736	-				-0.5
4,203,766	+				+0.1