Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03650

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
4,082,668	-				-0.2
4,082,705	-		MIT1002_03649	0.10	+0.7
4,082,706	+		MIT1002_03649	0.10	+1.5
4,082,762	-		MIT1002_03649	0.16	-2.0
4,082,848	+		MIT1002_03649	0.24	-0.5
4,082,851	-		MIT1002_03649	0.24	-0.1
4,082,861	-		MIT1002_03649	0.25	-0.4
4,082,867	-		MIT1002_03649	0.26	-1.5
4,082,867	-		MIT1002_03649	0.26	+0.1
4,083,164	+		MIT1002_03649	0.54	+0.7
4,083,169	+		MIT1002_03649	0.54	-0.4
4,083,172	-		MIT1002_03649	0.54	+0.1
4,083,242	+		MIT1002_03649	0.61	-2.3
4,083,242	+		MIT1002_03649	0.61	-1.2
4,083,244	-		MIT1002_03649	0.61	-1.3
4,083,250	-		MIT1002_03649	0.62	+0.3
4,083,250	-		MIT1002_03649	0.62	-1.3
4,083,250	-		MIT1002_03649	0.62	+1.0
4,083,250	-		MIT1002_03649	0.62	-1.3
4,083,306	+		MIT1002_03649	0.67	+0.8
4,083,314	-		MIT1002_03649	0.68	-0.6
4,083,321	+		MIT1002_03649	0.68	+0.3
4,083,339	+		MIT1002_03649	0.70	+0.8
4,083,340	-		MIT1002_03649	0.70	-0.3
4,083,404	+		MIT1002_03649	0.76	-1.0
4,083,436	+		MIT1002_03649	0.79	+0.3
4,083,436	+		MIT1002_03649	0.79	+1.1
4,083,444	-		MIT1002_03649	0.80	+0.5
4,083,444	-		MIT1002_03649	0.80	+0.7
4,083,521	-		MIT1002_03649	0.87	-0.8
4,083,594	-				-0.1
4,083,594	-				+2.9
4,083,594	-				+0.8
4,083,598	+				+0.3
4,083,598	+				+0.2
4,083,598	+				-1.7
4,083,635	-				+2.0
4,083,635	-				+1.3
4,083,645	-				-1.3
4,083,648	+				+0.3
4,083,656	-				+1.1
4,083,692	-				+1.3
4,083,720	+				+2.4
4,083,771	-		MIT1002_03650	0.12	-2.1
4,083,886	-		MIT1002_03650	0.24	-0.1
4,083,886	-		MIT1002_03650	0.24	-0.4
4,083,886	-		MIT1002_03650	0.24	-0.8
4,083,893	+		MIT1002_03650	0.25	-1.2
4,083,915	+		MIT1002_03650	0.27	+0.5
4,083,937	+		MIT1002_03650	0.30	-0.4
4,083,945	-		MIT1002_03650	0.31	-2.1
4,083,954	+		MIT1002_03650	0.32	+0.6
4,083,962	-		MIT1002_03650	0.32	+0.3
4,084,309	+		MIT1002_03650	0.69	-0.4
4,084,318	-		MIT1002_03650	0.70	+1.2
4,084,329	-		MIT1002_03650	0.71	-1.0
4,084,329	-		MIT1002_03650	0.71	+0.3
4,084,329	-		MIT1002_03650	0.71	+0.7
4,084,390	+		MIT1002_03650	0.77	-0.5
4,084,468	+		MIT1002_03650	0.86	+0.2
4,084,501	+		MIT1002_03650	0.89	+0.1
4,084,514	-				-0.4
4,084,543	-				+0.1
4,084,608	+				+1.8
4,084,647	-				-1.1
4,084,663	-				+0.0
4,084,707	+				+1.9
4,084,807	+		MIT1002_03651	0.11	-0.0
4,084,829	-		MIT1002_03651	0.12	-0.2
4,084,884	-		MIT1002_03651	0.16	+0.5
4,084,940	+		MIT1002_03651	0.19	+2.3
4,084,940	+		MIT1002_03651	0.19	+1.2
4,084,948	-		MIT1002_03651	0.20	-0.4
4,084,948	-		MIT1002_03651	0.20	+0.2
4,084,948	-		MIT1002_03651	0.20	+1.5
4,084,948	-		MIT1002_03651	0.20	+0.1
4,084,968	-		MIT1002_03651	0.21	+2.1
4,084,985	+		MIT1002_03651	0.22	+1.1
4,084,993	-		MIT1002_03651	0.23	+0.0
4,084,993	-		MIT1002_03651	0.23	+0.0
4,085,000	+		MIT1002_03651	0.23	+2.2
4,085,081	+		MIT1002_03651	0.28	+0.1
4,085,261	+		MIT1002_03651	0.40	+3.7
4,085,261	+		MIT1002_03651	0.40	+2.9
4,085,353	+		MIT1002_03651	0.46	-0.3
4,085,361	-		MIT1002_03651	0.46	-0.3
4,085,371	-		MIT1002_03651	0.47	+0.3
4,085,394	-		MIT1002_03651	0.49	+0.4
4,085,462	+		MIT1002_03651	0.53	-2.3
4,085,464	+		MIT1002_03651	0.53	-0.3
4,085,598	+		MIT1002_03651	0.62	-1.3
4,085,598	+		MIT1002_03651	0.62	+1.4
4,085,598	+		MIT1002_03651	0.62	-1.6