Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03570

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
3,996,692	-				+1.8
3,996,739	+				-0.7
3,996,747	-				-0.2
3,996,747	-				+0.1
3,996,798	+				-0.5
3,996,798	+				-0.5
3,996,798	+				+0.1
3,996,806	-				-0.1
3,996,806	-				+1.7
3,996,806	-				-0.8
3,996,806	-				-0.5
3,996,806	-				+1.3
3,996,853	+				-0.1
3,996,859	-				-0.4
3,996,861	-				+1.3
3,996,931	+				-0.8
3,996,931	+				-2.7
3,996,936	+				+0.5
3,996,947	+				+0.0
3,996,952	-				-0.6
3,997,044	-		MIT1002_03570	0.19	-0.5
3,997,046	+		MIT1002_03570	0.19	+0.0
3,997,046	+		MIT1002_03570	0.19	+1.4
3,997,046	+		MIT1002_03570	0.19	+1.3
3,997,054	-		MIT1002_03570	0.20	-1.3
3,997,054	-		MIT1002_03570	0.20	-0.4
3,997,060	+		MIT1002_03570	0.21	-0.6
3,997,070	+		MIT1002_03570	0.22	-0.3
3,997,070	+		MIT1002_03570	0.22	+1.6
3,997,070	+		MIT1002_03570	0.22	-0.9
3,997,070	+		MIT1002_03570	0.22	+0.2
3,997,070	+		MIT1002_03570	0.22	+1.0
3,997,070	+		MIT1002_03570	0.22	-0.3
3,997,075	+		MIT1002_03570	0.22	-0.9
3,997,078	-		MIT1002_03570	0.22	-0.2
3,997,078	-		MIT1002_03570	0.22	-0.1
3,997,078	-		MIT1002_03570	0.22	+1.1
3,997,078	-		MIT1002_03570	0.22	-0.9
3,997,083	-		MIT1002_03570	0.23	-0.6
3,997,093	-		MIT1002_03570	0.24	+1.2
3,997,093	-		MIT1002_03570	0.24	+1.0
3,997,132	-		MIT1002_03570	0.28	+1.5
3,997,142	+		MIT1002_03570	0.29	+1.1
3,997,157	+		MIT1002_03570	0.30	+0.0
3,997,160	-		MIT1002_03570	0.31	-0.6
3,997,160	-		MIT1002_03570	0.31	-1.9
3,997,165	-		MIT1002_03570	0.31	-0.2
3,997,165	-		MIT1002_03570	0.31	-0.1
3,997,207	-		MIT1002_03570	0.35	+0.5
3,997,207	-		MIT1002_03570	0.35	-1.3
3,997,207	-		MIT1002_03570	0.35	+0.2
3,997,208	-		MIT1002_03570	0.35	-0.1
3,997,208	-		MIT1002_03570	0.35	-0.5
3,997,208	-		MIT1002_03570	0.35	+0.8
3,997,228	+		MIT1002_03570	0.37	+3.8
3,997,276	-		MIT1002_03570	0.42	-0.4
3,997,297	-		MIT1002_03570	0.44	+2.1
3,997,307	-		MIT1002_03570	0.45	+0.7
3,997,324	+		MIT1002_03570	0.47	+0.0
3,997,330	-		MIT1002_03570	0.48	-1.4
3,997,359	+		MIT1002_03570	0.50	-0.5
3,997,369	+		MIT1002_03570	0.51	-0.7
3,997,372	+		MIT1002_03570	0.52	-0.1
3,997,385	-		MIT1002_03570	0.53	+0.3
3,997,451	-		MIT1002_03570	0.60	+0.2
3,997,451	-		MIT1002_03570	0.60	-0.1
3,997,494	-		MIT1002_03570	0.64	-0.4
3,997,571	+		MIT1002_03570	0.72	+0.8
3,997,571	+		MIT1002_03570	0.72	+0.2
3,997,603	+		MIT1002_03570	0.75	-0.5
3,997,603	+		MIT1002_03570	0.75	-1.5
3,997,610	-		MIT1002_03570	0.76	+1.1
3,997,654	-		MIT1002_03570	0.80	-1.0
3,997,672	+		MIT1002_03570	0.82	+0.3
3,997,715	-		MIT1002_03570	0.86	-0.1
3,997,717	+		MIT1002_03570	0.86	-1.4
3,997,777	+				+0.5
3,997,797	+				-0.6
3,997,797	+				-1.9
3,997,802	+				-0.4
3,997,802	+				-1.0
3,997,802	+				+1.1
3,997,802	+				-0.8
3,997,802	+				-0.2
3,997,804	+				+1.5
3,997,810	-				-0.9
3,997,810	-				-0.1
3,997,810	-				-0.8
3,997,810	-				-0.9
3,997,810	-				-1.1
3,997,815	+				-0.5
3,997,815	+				-1.4
3,997,833	-				-1.4
3,997,835	+				-0.3
3,997,835	+				+0.1
3,997,843	-				+1.3
3,997,843	-				+0.7
3,997,868	+				+2.6
3,997,902	+				-0.4
3,997,910	-				+0.6
3,997,948	-				+1.0
3,997,985	+				+1.1
3,997,993	-				-2.2
3,998,006	+				-1.3
3,998,021	+				-1.4
3,998,029	-				+0.6
3,998,048	-				-0.6
3,998,141	+				-0.5
3,998,162	+				-0.8
3,998,170	-				+0.3
3,998,172	-				+2.4