Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03232

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
3,600,241	+		MIT1002_03229	0.64	-0.6
3,600,284	-		MIT1002_03229	0.75	+1.7
3,600,288	-		MIT1002_03229	0.76	+1.1
3,600,327	-		MIT1002_03229	0.86	+0.2
3,600,327	-		MIT1002_03229	0.86	+1.2
3,600,329	-		MIT1002_03229	0.86	-1.1
3,600,329	-		MIT1002_03229	0.86	-1.0
3,600,454	-				-0.4
3,600,468	-				+0.4
3,600,502	+				-1.6
3,600,502	+				+0.1
3,600,502	+				-1.1
3,600,502	+				+0.9
3,600,510	-		MIT1002_03230	0.10	-0.5
3,600,659	-		MIT1002_03230	0.56	-1.3
3,600,681	-		MIT1002_03230	0.63	+2.6
3,600,698	+		MIT1002_03230	0.69	+0.7
3,600,821	+				+1.2
3,600,900	-		MIT1002_03231	0.30	-0.5
3,600,913	+		MIT1002_03231	0.34	+0.7
3,600,953	+		MIT1002_03231	0.45	+1.0
3,600,970	+		MIT1002_03231	0.50	-0.1
3,600,971	+		MIT1002_03231	0.50	-0.8
3,600,994	+		MIT1002_03231	0.57	+0.9
3,601,101	+		MIT1002_03231	0.87	+1.9
3,601,321	+				+0.7
3,601,377	-		MIT1002_03232	0.14	-1.4
3,601,472	-		MIT1002_03232	0.23	+1.2
3,601,487	-		MIT1002_03232	0.24	-1.6
3,601,492	-		MIT1002_03232	0.25	+0.2
3,601,609	+		MIT1002_03232	0.36	-0.8
3,601,612	-		MIT1002_03232	0.36	+1.0
3,601,617	-		MIT1002_03232	0.37	-0.2
3,601,617	-		MIT1002_03232	0.37	+0.2
3,601,633	+		MIT1002_03232	0.38	-0.5
3,601,645	-		MIT1002_03232	0.40	+0.3
3,601,733	-		MIT1002_03232	0.48	+0.3
3,601,826	-		MIT1002_03232	0.57	+1.2
3,601,831	-		MIT1002_03232	0.57	-0.7
3,601,839	+		MIT1002_03232	0.58	+0.9
3,601,854	-		MIT1002_03232	0.60	-0.1
3,601,854	-		MIT1002_03232	0.60	+2.2
3,601,977	+		MIT1002_03232	0.71	+1.2
3,602,079	-		MIT1002_03232	0.81	-1.5
3,602,081	+		MIT1002_03232	0.81	+2.5
3,602,136	-		MIT1002_03232	0.87	+0.1
3,602,194	-				-0.3
3,602,270	+				+0.5
3,602,277	+				-0.1
3,602,277	+				-1.3
3,602,285	-				+1.2
3,602,354	+				+0.9
3,602,362	-				-1.4
3,602,549	+		MIT1002_03233	0.21	-1.1
3,602,549	+		MIT1002_03233	0.21	+0.5
3,602,566	+		MIT1002_03233	0.22	+0.7
3,602,574	-		MIT1002_03233	0.23	+0.0
3,602,581	+		MIT1002_03233	0.23	-0.7
3,602,590	-		MIT1002_03233	0.24	-1.9
3,602,594	+		MIT1002_03233	0.24	+2.2
3,602,608	+		MIT1002_03233	0.25	-0.5
3,602,608	+		MIT1002_03233	0.25	-0.2
3,602,623	+		MIT1002_03233	0.26	+1.5
3,602,725	+		MIT1002_03233	0.34	-1.3
3,602,937	+		MIT1002_03233	0.51	+1.2
3,602,937	+		MIT1002_03233	0.51	-0.9
3,603,115	+		MIT1002_03233	0.64	+0.6
3,603,138	-		MIT1002_03233	0.66	-0.3
3,603,167	+		MIT1002_03233	0.68	+0.8
3,603,172	+		MIT1002_03233	0.69	-1.0
3,603,175	-		MIT1002_03233	0.69	-0.6
3,603,180	-		MIT1002_03233	0.69	-0.2
3,603,215	+		MIT1002_03233	0.72	-1.7