Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02690

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,990,353	+				-0.3
2,990,404	+				+0.9
2,990,410	+				+1.3
2,990,410	+				+1.5
2,990,410	+				-0.4
2,990,412	-				+1.2
2,990,418	-				-0.3
2,990,418	-				+0.4
2,990,418	-				+3.4
2,990,418	-				-0.6
2,990,418	-				+1.7
2,990,418	-				+0.6
2,990,418	-				+1.4
2,990,420	+				-0.1
2,990,420	+				-1.2
2,990,425	+				-0.2
2,990,425	+				-2.2
2,990,428	-				+0.7
2,990,430	+				-0.1
2,990,433	-				-1.5
2,990,433	-				+0.1
2,990,433	-				-0.2
2,990,433	-				-0.2
2,990,472	+				-0.9
2,990,515	+		MIT1002_02689	0.14	+0.6
2,990,569	+		MIT1002_02689	0.19	+0.7
2,990,590	-		MIT1002_02689	0.22	-0.8
2,990,645	-		MIT1002_02689	0.28	+0.0
2,990,652	-		MIT1002_02689	0.28	-2.0
2,990,766	-		MIT1002_02689	0.41	-0.3
2,990,782	+		MIT1002_02689	0.42	+1.0
2,990,889	+		MIT1002_02689	0.54	+0.1
2,990,968	-		MIT1002_02689	0.62	+0.6
2,991,049	-		MIT1002_02689	0.71	+1.4
2,991,069	-		MIT1002_02689	0.73	+0.2
2,991,069	-		MIT1002_02689	0.73	-0.6
2,991,076	+		MIT1002_02689	0.74	-1.0
2,991,100	+		MIT1002_02689	0.77	-1.5
2,991,106	-		MIT1002_02689	0.77	-1.0
2,991,108	-		MIT1002_02689	0.77	+0.2
2,991,163	-		MIT1002_02689	0.83	-0.7
2,991,251	-				-2.6
2,991,251	-				-1.3
2,991,349	+				-1.2
2,991,354	+				-0.8
2,991,357	-				-0.6
2,991,409	+		MIT1002_02690	0.12	+0.8
2,991,469	+		MIT1002_02690	0.20	+0.0
2,991,469	+		MIT1002_02690	0.20	-0.7
2,991,558	+		MIT1002_02690	0.32	+0.0
2,991,564	+		MIT1002_02690	0.32	-1.1
2,991,566	-		MIT1002_02690	0.33	-0.6
2,991,566	-		MIT1002_02690	0.33	+1.6
2,991,675	-		MIT1002_02690	0.47	-0.3
2,991,703	-		MIT1002_02690	0.51	+1.5
2,991,719	-		MIT1002_02690	0.53	-1.4
2,991,729	-		MIT1002_02690	0.54	-1.2
2,991,747	-		MIT1002_02690	0.56	-0.6
2,991,749	+		MIT1002_02690	0.57	-0.8
2,991,757	-		MIT1002_02690	0.58	-1.3
2,991,757	-		MIT1002_02690	0.58	-0.9
2,991,757	-		MIT1002_02690	0.58	-1.3
2,991,757	-		MIT1002_02690	0.58	+0.0
2,991,761	-		MIT1002_02690	0.58	-0.0
2,991,854	+		MIT1002_02690	0.70	+1.0
2,991,862	-		MIT1002_02690	0.72	-0.0
2,991,917	-		MIT1002_02690	0.79	-2.4
2,992,049	+				-1.1
2,992,055	+				-1.1
2,992,084	-				-0.1
2,992,210	-				+2.0
2,992,344	+				+0.4
2,992,391	-				-0.7
2,992,417	+				-1.0
2,992,425	-				+0.6
2,992,454	+		MIT1002_02691	0.11	+0.3
2,992,565	+		MIT1002_02691	0.46	-0.3
2,992,610	+		MIT1002_02691	0.61	+2.4
2,992,610	+		MIT1002_02691	0.61	+0.8
2,992,610	+		MIT1002_02691	0.61	+1.2
2,992,610	+		MIT1002_02691	0.61	+0.7
2,992,610	+		MIT1002_02691	0.61	+0.8
2,992,610	+		MIT1002_02691	0.61	+1.0
2,992,610	+		MIT1002_02691	0.61	-0.8
2,992,725	+				+0.9
2,992,725	+				-0.2