Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02652

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,947,704	-				-0.4
2,947,704	-				+0.4
2,947,707	+				+0.3
2,947,707	-				+0.8
2,947,743	-				+0.0
2,947,754	-				-1.3
2,947,830	+		MIT1002_02651	0.12	+1.1
2,947,885	-		MIT1002_02651	0.20	-1.2
2,947,993	-		MIT1002_02651	0.35	-0.0
2,948,003	-		MIT1002_02651	0.36	+1.9
2,948,003	-		MIT1002_02651	0.36	+1.6
2,948,015	+		MIT1002_02651	0.38	+0.7
2,948,015	+		MIT1002_02651	0.38	+0.8
2,948,060	+		MIT1002_02651	0.44	-2.3
2,948,060	+		MIT1002_02651	0.44	+1.6
2,948,060	+		MIT1002_02651	0.44	-1.3
2,948,060	+		MIT1002_02651	0.44	-1.8
2,948,060	+		MIT1002_02651	0.44	+1.1
2,948,065	+		MIT1002_02651	0.45	+0.1
2,948,066	-		MIT1002_02651	0.45	+0.3
2,948,068	-		MIT1002_02651	0.45	+0.4
2,948,075	+		MIT1002_02651	0.46	-0.5
2,948,075	+		MIT1002_02651	0.46	-0.3
2,948,075	+		MIT1002_02651	0.46	+0.4
2,948,078	-		MIT1002_02651	0.46	+0.5
2,948,083	-		MIT1002_02651	0.47	+1.2
2,948,083	-		MIT1002_02651	0.47	+0.8
2,948,083	-		MIT1002_02651	0.47	-1.6
2,948,083	-		MIT1002_02651	0.47	+0.5
2,948,091	-		MIT1002_02651	0.48	+1.0
2,948,117	-		MIT1002_02651	0.52	-0.9
2,948,145	+		MIT1002_02651	0.56	-0.5
2,948,148	-		MIT1002_02651	0.56	-1.0
2,948,158	-		MIT1002_02651	0.57	-1.0
2,948,218	+		MIT1002_02651	0.66	+0.5
2,948,218	-		MIT1002_02651	0.66	-0.4
2,948,311	-		MIT1002_02651	0.79	-0.7
2,948,323	-		MIT1002_02651	0.80	+1.1
2,948,323	-		MIT1002_02651	0.80	-0.3
2,948,528	-				+0.8
2,948,602	+				-0.1
2,948,681	-				-0.5
2,948,733	-				-0.2
2,948,824	+		MIT1002_02652	0.15	-0.2
2,948,832	-		MIT1002_02652	0.16	+0.4
2,948,839	+		MIT1002_02652	0.17	-0.7
2,948,852	-		MIT1002_02652	0.19	-2.0
2,948,858	+		MIT1002_02652	0.20	+0.2
2,948,915	+		MIT1002_02652	0.27	-0.1
2,948,940	-		MIT1002_02652	0.30	-2.0
2,948,984	+		MIT1002_02652	0.36	+1.3
2,948,999	-		MIT1002_02652	0.38	-0.6
2,949,014	-		MIT1002_02652	0.39	+1.1
2,949,048	+		MIT1002_02652	0.44	+2.9
2,949,055	+		MIT1002_02652	0.45	+2.4
2,949,056	-		MIT1002_02652	0.45	+0.9
2,949,057	-		MIT1002_02652	0.45	-0.2
2,949,063	-		MIT1002_02652	0.46	+1.7
2,949,147	+		MIT1002_02652	0.56	+1.0
2,949,232	+		MIT1002_02652	0.67	+1.0
2,949,314	+		MIT1002_02652	0.77	-0.3
2,949,331	-		MIT1002_02652	0.80	+1.2
2,949,337	-		MIT1002_02652	0.80	-1.2
2,949,500	+				+1.0
2,949,530	-				+2.1
2,949,646	+				-0.9
2,949,783	+		MIT1002_02653	0.47	-1.4
2,949,812	-		MIT1002_02653	0.56	-2.3