Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02485

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,771,716	-		MIT1002_02484	0.39	-0.2
2,771,743	+		MIT1002_02484	0.41	-0.6
2,771,790	+		MIT1002_02484	0.45	-0.3
2,771,810	-		MIT1002_02484	0.46	+1.8
2,771,828	+		MIT1002_02484	0.48	-1.3
2,771,842	-		MIT1002_02484	0.49	-0.5
2,771,843	-		MIT1002_02484	0.49	+0.3
2,771,846	+		MIT1002_02484	0.49	+0.2
2,771,852	+		MIT1002_02484	0.49	-1.0
2,771,852	+		MIT1002_02484	0.49	+0.4
2,771,860	-		MIT1002_02484	0.50	-1.0
2,771,868	-		MIT1002_02484	0.50	-0.5
2,771,886	-		MIT1002_02484	0.52	-1.5
2,771,912	+		MIT1002_02484	0.54	-0.5
2,771,912	+		MIT1002_02484	0.54	+1.9
2,771,912	+		MIT1002_02484	0.54	-0.1
2,771,915	-		MIT1002_02484	0.54	+0.4
2,771,920	-		MIT1002_02484	0.54	+0.1
2,771,922	+		MIT1002_02484	0.54	-0.0
2,771,930	-		MIT1002_02484	0.55	-1.2
2,771,930	-		MIT1002_02484	0.55	-0.1
2,771,953	+		MIT1002_02484	0.57	+0.4
2,771,980	-		MIT1002_02484	0.59	+0.3
2,771,982	+		MIT1002_02484	0.59	-0.7
2,772,025	+		MIT1002_02484	0.62	+0.2
2,772,027	+		MIT1002_02484	0.62	-0.9
2,772,027	+		MIT1002_02484	0.62	+0.9
2,772,071	+		MIT1002_02484	0.65	+1.6
2,772,071	+		MIT1002_02484	0.65	+3.8
2,772,084	+		MIT1002_02484	0.66	+0.1
2,772,253	+		MIT1002_02484	0.79	-0.7
2,772,260	-		MIT1002_02484	0.79	-0.9
2,772,308	+		MIT1002_02484	0.83	+0.4
2,772,308	+		MIT1002_02484	0.83	+1.7
2,772,308	+		MIT1002_02484	0.83	+0.1
2,772,308	+		MIT1002_02484	0.83	-1.3
2,772,308	+		MIT1002_02484	0.83	-0.9
2,772,314	-		MIT1002_02484	0.83	-0.1
2,772,316	-		MIT1002_02484	0.83	-0.7
2,772,316	-		MIT1002_02484	0.83	+0.1
2,772,322	+		MIT1002_02484	0.84	-1.2
2,772,323	+		MIT1002_02484	0.84	-1.6
2,772,331	-		MIT1002_02484	0.85	-0.5
2,772,332	-		MIT1002_02484	0.85	+0.1
2,772,436	+				-0.4
2,772,436	+				-1.3
2,772,436	+				-1.5
2,772,438	+				-1.3
2,772,446	-				-0.3
2,772,464	+				-0.0
2,772,469	+				-0.9
2,772,472	+				+0.2
2,772,474	+				+1.4
2,772,474	+				+2.4
2,772,482	-				-0.1
2,772,542	+				+2.1
2,772,550	-				-0.5
2,772,550	-				-1.4
2,772,739	+		MIT1002_02485	0.51	+0.3
2,772,766	+		MIT1002_02485	0.86	+2.4
2,772,776	+				-1.0
2,772,784	-				-0.6
2,772,960	-		MIT1002_02486	0.16	-0.7
2,772,968	-		MIT1002_02486	0.17	-0.5
2,773,087	+		MIT1002_02486	0.43	+1.8
2,773,094	-		MIT1002_02486	0.45	-1.0
2,773,111	+		MIT1002_02486	0.48	-1.2
2,773,197	-		MIT1002_02486	0.67	-0.6
2,773,202	-		MIT1002_02486	0.68	-0.2
2,773,204	+		MIT1002_02486	0.68	-0.0
2,773,212	-		MIT1002_02486	0.70	+1.1
2,773,212	-		MIT1002_02486	0.70	-0.5
2,773,284	+		MIT1002_02486	0.86	-0.2
2,773,292	-		MIT1002_02486	0.87	-1.2
2,773,453	+				-0.3
2,773,607	-		MIT1002_02487	0.14	-0.1
2,773,620	+		MIT1002_02487	0.16	-0.5
2,773,628	-		MIT1002_02487	0.17	+1.4
2,773,641	+		MIT1002_02487	0.18	-0.3
2,773,696	+		MIT1002_02487	0.24	-0.8
2,773,696	+		MIT1002_02487	0.24	-1.2
2,773,704	-		MIT1002_02487	0.25	-1.4
2,773,751	-		MIT1002_02487	0.30	-0.9
2,773,754	-		MIT1002_02487	0.31	+0.3