Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02278

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,536,993	+		MIT1002_02277	0.26	+1.0
2,537,025	-		MIT1002_02277	0.29	+1.3
2,537,046	+		MIT1002_02277	0.31	+0.8
2,537,054	-		MIT1002_02277	0.32	-2.4
2,537,104	-		MIT1002_02277	0.37	-0.9
2,537,344	-		MIT1002_02277	0.62	+0.2
2,537,346	+		MIT1002_02277	0.62	+2.1
2,537,354	-		MIT1002_02277	0.63	-0.1
2,537,354	-		MIT1002_02277	0.63	+0.7
2,537,354	-		MIT1002_02277	0.63	-0.7
2,537,354	-		MIT1002_02277	0.63	+2.7
2,537,365	+		MIT1002_02277	0.64	+1.0
2,537,401	+		MIT1002_02277	0.67	+0.6
2,537,409	-		MIT1002_02277	0.68	+0.0
2,537,468	+		MIT1002_02277	0.74	-1.2
2,537,476	-		MIT1002_02277	0.75	+1.7
2,537,481	+		MIT1002_02277	0.75	+0.8
2,537,501	+		MIT1002_02277	0.77	+1.3
2,537,503	+		MIT1002_02277	0.78	+1.2
2,537,511	-		MIT1002_02277	0.78	+0.7
2,537,511	-		MIT1002_02277	0.78	+0.6
2,537,511	-		MIT1002_02277	0.78	-0.4
2,537,511	-		MIT1002_02277	0.78	+0.6
2,537,539	-		MIT1002_02277	0.81	-1.0
2,537,577	-		MIT1002_02277	0.85	-0.7
2,537,613	-		MIT1002_02277	0.89	+0.6
2,537,680	+				+2.5
2,537,692	+				+0.3
2,537,692	+				-1.6
2,537,692	+				+0.7
2,537,700	-				+0.6
2,537,715	-				-0.5
2,537,742	+				-0.3
2,537,793	+				+0.2
2,537,801	-				-0.7
2,537,801	-				-1.6
2,537,828	+				-0.9
2,537,858	+				-0.7
2,537,914	-				+0.5
2,537,921	-				-0.4
2,537,986	+				+0.2
2,538,022	+				-1.2
2,538,042	+				-0.8
2,538,042	-				-0.1
2,538,050	-				+0.8
2,538,100	+				-0.7
2,538,107	-				-1.3
2,538,143	+				+0.2
2,538,168	+				-0.2
2,538,218	-		MIT1002_02278	0.10	-0.7
2,538,228	-		MIT1002_02278	0.11	+1.1
2,538,299	-		MIT1002_02278	0.14	-0.8
2,538,305	+		MIT1002_02278	0.14	-0.8
2,538,374	-		MIT1002_02278	0.17	+1.0
2,538,491	+		MIT1002_02278	0.22	-1.5
2,538,491	+		MIT1002_02278	0.22	+0.2
2,538,491	+		MIT1002_02278	0.22	+0.9
2,538,499	-		MIT1002_02278	0.22	+0.6
2,538,499	-		MIT1002_02278	0.22	-1.0
2,538,549	-		MIT1002_02278	0.25	-0.2
2,538,605	-		MIT1002_02278	0.27	+0.8
2,538,660	+		MIT1002_02278	0.29	+0.1
2,538,668	-		MIT1002_02278	0.30	-1.1
2,538,687	+		MIT1002_02278	0.31	-0.6
2,538,697	+		MIT1002_02278	0.31	-0.6
2,538,717	+		MIT1002_02278	0.32	-0.8
2,538,806	-		MIT1002_02278	0.36	-0.8
2,538,812	-		MIT1002_02278	0.36	+1.2
2,539,046	-		MIT1002_02278	0.46	-0.9
2,539,049	-		MIT1002_02278	0.47	+0.6
2,539,058	-		MIT1002_02278	0.47	-0.7
2,539,074	-		MIT1002_02278	0.48	-0.4
2,539,107	-		MIT1002_02278	0.49	+1.6
2,539,307	+		MIT1002_02278	0.58	+0.6
2,539,327	-		MIT1002_02278	0.59	+0.8
2,539,363	+		MIT1002_02278	0.60	+0.2
2,539,371	-		MIT1002_02278	0.61	-0.5
2,539,418	-		MIT1002_02278	0.63	-0.2
2,539,461	+		MIT1002_02278	0.65	-0.5
2,539,538	+		MIT1002_02278	0.68	+0.6
2,539,563	+		MIT1002_02278	0.69	-1.3
2,539,564	-		MIT1002_02278	0.69	-1.5
2,539,869	+		MIT1002_02278	0.82	+0.7
2,539,869	+		MIT1002_02278	0.82	+0.2
2,539,874	+		MIT1002_02278	0.83	-0.6
2,539,874	+		MIT1002_02278	0.83	-0.5
2,540,021	+		MIT1002_02278	0.89	-0.4
2,540,064	+				+1.5
2,540,089	+				-0.4
2,540,131	+				+1.8
2,540,295	+				-0.2
2,540,329	-				-1.7
2,540,403	+		MIT1002_02279	0.17	-0.4
2,540,403	+		MIT1002_02279	0.17	-1.6
2,540,411	-		MIT1002_02279	0.20	-2.7
2,540,429	+		MIT1002_02279	0.25	+0.9
2,540,429	+		MIT1002_02279	0.25	-0.4
2,540,437	-		MIT1002_02279	0.27	+0.3
2,540,552	-		MIT1002_02279	0.59	-0.3
2,540,597	-		MIT1002_02279	0.72	+1.2
2,540,625	+		MIT1002_02279	0.80	+1.6