Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02137

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,397,073	+				+0.4
2,397,193	+		MIT1002_02135	0.45	-0.9
2,397,208	-		MIT1002_02135	0.52	+1.2
2,397,364	+				-0.8
2,397,364	+				-1.2
2,397,393	+		MIT1002_02136	0.13	-0.9
2,397,401	-		MIT1002_02136	0.14	-1.0
2,397,431	+		MIT1002_02136	0.19	+0.9
2,397,433	+		MIT1002_02136	0.19	-0.6
2,397,433	+		MIT1002_02136	0.19	-0.2
2,397,434	-		MIT1002_02136	0.19	-0.4
2,397,441	-		MIT1002_02136	0.20	+0.2
2,397,468	+		MIT1002_02136	0.25	+1.2
2,397,518	+		MIT1002_02136	0.32	-1.1
2,397,552	-		MIT1002_02136	0.37	-1.2
2,397,599	+		MIT1002_02136	0.44	-0.7
2,397,599	+		MIT1002_02136	0.44	+0.2
2,397,609	+		MIT1002_02136	0.46	+0.4
2,397,618	-		MIT1002_02136	0.47	-0.5
2,397,618	-		MIT1002_02136	0.47	-0.1
2,397,727	+		MIT1002_02136	0.64	+0.4
2,397,742	+		MIT1002_02136	0.66	-0.4
2,397,750	-		MIT1002_02136	0.67	-0.4
2,397,847	+		MIT1002_02136	0.82	-0.4
2,397,992	+				-0.5
2,397,992	+				-1.8
2,397,992	+				-1.9
2,398,072	-				-1.9
2,398,157	+		MIT1002_02137	0.20	-1.9
2,398,165	-		MIT1002_02137	0.21	+0.8
2,398,316	-		MIT1002_02137	0.41	-1.9
2,398,322	-		MIT1002_02137	0.42	+0.9
2,398,338	+		MIT1002_02137	0.44	+0.6
2,398,344	-		MIT1002_02137	0.45	-0.1
2,398,477	+		MIT1002_02137	0.63	-2.4
2,398,477	+		MIT1002_02137	0.63	+0.6
2,398,479	+		MIT1002_02137	0.63	-1.7
2,398,485	-		MIT1002_02137	0.64	-1.1
2,398,522	+		MIT1002_02137	0.69	-2.0
2,398,522	+		MIT1002_02137	0.69	-1.3
2,398,522	+		MIT1002_02137	0.69	+0.1
2,398,522	+		MIT1002_02137	0.69	-3.3
2,398,530	-		MIT1002_02137	0.70	+1.2
2,398,591	+		MIT1002_02137	0.79	-3.8
2,398,625	+		MIT1002_02137	0.83	-0.9
2,398,625	+		MIT1002_02137	0.83	+0.1
2,398,633	-		MIT1002_02137	0.84	-1.6
2,398,716	-				+1.1
2,398,734	-				-0.3
2,398,813	+				+1.6
2,398,821	-				-0.7
2,398,989	+				-0.2
2,399,018	-				+1.6
2,399,055	+				-1.7
2,399,150	+		MIT1002_02138	0.17	+2.1
2,399,158	-		MIT1002_02138	0.18	+1.3
2,399,158	-		MIT1002_02138	0.18	+0.7
2,399,330	-		MIT1002_02138	0.36	+1.7
2,399,410	+		MIT1002_02138	0.45	+1.9
2,399,430	+		MIT1002_02138	0.47	+1.0
2,399,433	-		MIT1002_02138	0.48	-0.3
2,399,433	-		MIT1002_02138	0.48	-0.3
2,399,433	-		MIT1002_02138	0.48	+0.6
2,399,443	-		MIT1002_02138	0.49	-0.9
2,399,579	+		MIT1002_02138	0.63	-2.0
2,399,580	+		MIT1002_02138	0.64	-0.0
2,399,587	-		MIT1002_02138	0.64	+0.2