Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02074

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,332,649	+				+1.6
2,332,673	+				-0.5
2,332,673	+				-0.5
2,332,681	-				-0.5
2,332,706	-				+0.2
2,332,717	+				-1.6
2,332,725	-				+1.2
2,332,746	-				-1.9
2,332,746	-				-0.2
2,332,876	-		MIT1002_02073	0.22	-0.8
2,333,035	+		MIT1002_02073	0.39	+0.3
2,333,044	+		MIT1002_02073	0.40	+1.1
2,333,052	-		MIT1002_02073	0.41	+2.2
2,333,118	-		MIT1002_02073	0.48	-0.8
2,333,125	-		MIT1002_02073	0.48	-1.0
2,333,136	+		MIT1002_02073	0.49	+11.6
2,333,174	+		MIT1002_02073	0.53	+0.7
2,333,257	-		MIT1002_02073	0.62	-1.2
2,333,502	+		MIT1002_02073	0.88	-0.1
2,333,578	+				-0.0
2,333,676	-				+2.7
2,333,720	-		MIT1002_02074	0.15	-0.0
2,333,764	+		MIT1002_02074	0.21	+0.4
2,333,776	+		MIT1002_02074	0.23	-0.9
2,333,816	+		MIT1002_02074	0.29	+0.9
2,333,816	+		MIT1002_02074	0.29	+0.4
2,333,824	-		MIT1002_02074	0.30	-1.9
2,333,826	+		MIT1002_02074	0.30	+2.2
2,333,894	-		MIT1002_02074	0.40	+0.9
2,334,012	+		MIT1002_02074	0.57	+0.1
2,334,015	-		MIT1002_02074	0.58	+0.2
2,334,020	-		MIT1002_02074	0.58	-2.2
2,334,159	+		MIT1002_02074	0.79	+0.2
2,334,216	-		MIT1002_02074	0.87	-0.2
2,334,234	-		MIT1002_02074	0.89	+0.0
2,334,307	+				+2.0
2,334,323	-				+0.7
2,334,323	-				-2.2
2,334,505	+				+1.9
2,334,511	-				-0.1
2,334,511	-				+1.1
2,334,540	-				+0.7
2,334,621	-		MIT1002_02075	0.12	+0.5
2,334,717	-		MIT1002_02075	0.19	+0.9
2,334,847	+		MIT1002_02075	0.29	-1.6
2,334,890	+		MIT1002_02075	0.32	+0.4
2,334,971	+		MIT1002_02075	0.39	+0.7
2,335,036	-		MIT1002_02075	0.44	+0.6
2,335,036	-		MIT1002_02075	0.44	-0.0
2,335,044	+		MIT1002_02075	0.44	-2.8
2,335,110	+		MIT1002_02075	0.49	-0.6
2,335,144	-		MIT1002_02075	0.52	-2.5
2,335,144	-		MIT1002_02075	0.52	-0.0
2,335,247	+		MIT1002_02075	0.60	+1.6
2,335,282	-		MIT1002_02075	0.62	+1.4
2,335,288	+		MIT1002_02075	0.63	-1.8
2,335,288	+		MIT1002_02075	0.63	+0.2