Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01969

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
2,202,487	-		MIT1002_01968	0.66	+1.8
2,202,505	-		MIT1002_01968	0.66	-0.8
2,202,548	+		MIT1002_01968	0.68	-1.1
2,202,565	+		MIT1002_01968	0.69	-0.2
2,202,573	-		MIT1002_01968	0.69	-0.2
2,202,596	+		MIT1002_01968	0.70	+1.3
2,202,677	+		MIT1002_01968	0.73	+1.5
2,202,684	-		MIT1002_01968	0.73	-0.5
2,202,688	+		MIT1002_01968	0.73	-1.8
2,202,693	+		MIT1002_01968	0.74	+0.0
2,202,696	-		MIT1002_01968	0.74	+2.1
2,202,698	+		MIT1002_01968	0.74	-2.7
2,202,701	-		MIT1002_01968	0.74	+1.7
2,202,701	-		MIT1002_01968	0.74	-0.8
2,202,725	+		MIT1002_01968	0.75	-0.3
2,202,755	+		MIT1002_01968	0.76	+2.1
2,202,873	-		MIT1002_01968	0.81	+2.9
2,202,936	-		MIT1002_01968	0.83	+2.6
2,203,001	+		MIT1002_01968	0.86	-0.4
2,203,030	-		MIT1002_01968	0.87	-0.2
2,203,110	-				-1.1
2,203,120	+				-0.3
2,203,183	+				-0.5
2,203,209	-				-1.4
2,203,209	-				-2.8
2,203,219	-				-1.0
2,203,268	-				-0.1
2,203,273	-				-0.0
2,203,283	-				-1.2
2,203,311	+				-0.4
2,203,328	-				+0.3
2,203,405	-				-0.6
2,203,782	-		MIT1002_01969	0.29	+1.4
2,203,796	+		MIT1002_01969	0.31	-0.8
2,203,850	-		MIT1002_01969	0.36	-0.5
2,203,884	+		MIT1002_01969	0.39	-1.2
2,203,895	+		MIT1002_01969	0.40	-1.2
2,203,912	+		MIT1002_01969	0.42	-0.7
2,203,914	+		MIT1002_01969	0.42	+0.2
2,203,924	+		MIT1002_01969	0.43	+2.3
2,203,924	+		MIT1002_01969	0.43	+1.4
2,203,924	+		MIT1002_01969	0.43	+1.0
2,204,091	+		MIT1002_01969	0.59	-1.1
2,204,147	-		MIT1002_01969	0.64	+3.5
2,204,189	+		MIT1002_01969	0.68	+0.5
2,204,196	+		MIT1002_01969	0.69	-0.7
2,204,204	-		MIT1002_01969	0.70	+0.0
2,204,234	+		MIT1002_01969	0.72	-0.7
2,204,242	-		MIT1002_01969	0.73	-1.5
2,204,280	-		MIT1002_01969	0.77	+0.5
2,204,309	+		MIT1002_01969	0.80	-0.1
2,204,410	+		MIT1002_01969	0.89	+0.5
2,204,516	-				+0.3
2,204,523	-				-1.0
2,204,799	+		MIT1002_01970	0.28	+0.1
2,204,868	+		MIT1002_01970	0.39	-0.4
2,204,879	+		MIT1002_01970	0.41	+0.6
2,205,028	-		MIT1002_01970	0.65	-1.1
2,205,028	-		MIT1002_01970	0.65	-0.7
2,205,052	-		MIT1002_01970	0.69	-2.0
2,205,059	-		MIT1002_01970	0.70	-1.0
2,205,085	+		MIT1002_01970	0.74	+0.1
2,205,208	-				+0.1
2,205,273	+				-0.6
2,205,457	-				+0.3