Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01792

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
1,993,584	+		MIT1002_01791	0.41	-2.0
1,993,627	+		MIT1002_01791	0.44	-0.2
1,993,939	-		MIT1002_01791	0.63	-0.8
1,993,991	+		MIT1002_01791	0.66	-1.0
1,993,991	+		MIT1002_01791	0.66	+0.7
1,993,991	+		MIT1002_01791	0.66	-1.2
1,993,991	+		MIT1002_01791	0.66	-2.5
1,993,991	+		MIT1002_01791	0.66	-1.3
1,993,991	-		MIT1002_01791	0.66	-1.4
1,993,999	-		MIT1002_01791	0.66	-1.5
1,993,999	-		MIT1002_01791	0.66	+0.1
1,994,022	+		MIT1002_01791	0.68	+0.5
1,994,027	-		MIT1002_01791	0.68	-1.8
1,994,053	-		MIT1002_01791	0.69	+0.2
1,994,099	-		MIT1002_01791	0.72	+1.4
1,994,165	+		MIT1002_01791	0.76	-1.2
1,994,165	+		MIT1002_01791	0.76	-1.8
1,994,168	+		MIT1002_01791	0.76	-0.1
1,994,171	-		MIT1002_01791	0.77	+0.0
1,994,208	-		MIT1002_01791	0.79	-1.5
1,994,210	+		MIT1002_01791	0.79	+0.4
1,994,235	-		MIT1002_01791	0.80	-2.0
1,994,387	-		MIT1002_01791	0.89	+1.4
1,994,488	+				-0.4
1,994,496	-				+1.3
1,994,615	+		MIT1002_01792	0.13	+1.7
1,994,669	+		MIT1002_01792	0.26	-0.6
1,994,750	+		MIT1002_01792	0.45	+0.9
1,994,750	+		MIT1002_01792	0.45	+2.3
1,994,758	-		MIT1002_01792	0.47	-1.5
1,994,830	-		MIT1002_01792	0.64	+0.3
1,994,865	-		MIT1002_01792	0.72	-0.7
1,994,892	-		MIT1002_01792	0.79	+0.7
1,994,902	-		MIT1002_01792	0.81	+0.5
1,994,917	+		MIT1002_01792	0.85	+1.3
1,994,956	+				+0.7
1,994,958	+				+0.3
1,994,958	+				-1.2
1,994,980	+				-0.6
1,995,037	+				-0.8
1,995,151	+				+0.1
1,995,185	+				-3.2
1,995,185	+				-2.3
1,995,191	-				+0.9
1,995,191	-				+0.1
1,995,193	-				-0.7
1,995,226	-				+0.4
1,995,239	+				+0.7
1,995,279	+				+0.3
1,995,298	+				+0.7
1,995,379	-		MIT1002_01793	0.13	-0.9
1,995,411	+		MIT1002_01793	0.14	-0.0
1,995,419	-		MIT1002_01793	0.15	+1.3
1,995,460	+		MIT1002_01793	0.17	-2.0
1,995,470	+		MIT1002_01793	0.17	+1.7
1,995,480	+		MIT1002_01793	0.17	+0.8
1,995,562	+		MIT1002_01793	0.21	+0.2
1,995,575	-		MIT1002_01793	0.21	-0.6
1,995,646	-		MIT1002_01793	0.24	-0.2
1,995,702	-		MIT1002_01793	0.27	-0.8
1,995,824	+		MIT1002_01793	0.32	-0.8
1,995,824	+		MIT1002_01793	0.32	+0.9
1,995,832	-		MIT1002_01793	0.32	+0.9
1,995,832	-		MIT1002_01793	0.32	-0.8
1,995,910	+		MIT1002_01793	0.36	+1.9