Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01641

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
1,810,598	-				-0.2
1,810,685	+				+1.2
1,810,705	-				+0.7
1,810,718	-				-3.8
1,810,830	+				-1.4
1,810,830	+				+0.8
1,810,830	+				-0.5
1,810,830	+				-0.6
1,810,838	-				-0.0
1,810,838	-				-2.7
1,810,838	-				+1.4
1,810,838	-				-1.1
1,810,841	-				+0.3
1,810,851	+				-0.7
1,810,888	+				-1.4
1,810,896	-				-0.1
1,810,896	-				+1.2
1,810,969	+				+1.3
1,810,990	+				+0.7
1,811,015	+		MIT1002_01640	0.12	-1.9
1,811,056	+		MIT1002_01640	0.19	+0.1
1,811,105	+		MIT1002_01640	0.27	+0.9
1,811,112	-		MIT1002_01640	0.28	-0.1
1,811,113	-		MIT1002_01640	0.29	-0.1
1,811,122	-		MIT1002_01640	0.30	-0.4
1,811,127	-		MIT1002_01640	0.31	-2.2
1,811,127	-		MIT1002_01640	0.31	-1.1
1,811,173	+		MIT1002_01640	0.39	+0.3
1,811,173	+		MIT1002_01640	0.39	+0.5
1,811,173	+		MIT1002_01640	0.39	-1.0
1,811,173	+		MIT1002_01640	0.39	-0.6
1,811,181	-		MIT1002_01640	0.40	-1.0
1,811,181	-		MIT1002_01640	0.40	-0.2
1,811,239	-		MIT1002_01640	0.50	+0.5
1,811,325	-		MIT1002_01640	0.64	+0.0
1,811,396	-		MIT1002_01640	0.76	+2.0
1,811,398	+		MIT1002_01640	0.77	+0.3
1,811,406	-		MIT1002_01640	0.78	-0.4
1,811,406	-		MIT1002_01640	0.78	-1.7
1,811,445	+		MIT1002_01640	0.85	+0.4
1,811,445	+		MIT1002_01640	0.85	-1.5
1,811,453	-		MIT1002_01640	0.86	+0.7
1,811,453	-		MIT1002_01640	0.86	+0.2
1,811,488	+				+0.9
1,811,579	+				-0.1
1,811,587	-				-1.7
1,811,663	-		MIT1002_01641	0.14	-1.2
1,811,665	+		MIT1002_01641	0.14	-0.6
1,811,665	+		MIT1002_01641	0.14	-0.1
1,811,673	-		MIT1002_01641	0.16	+0.9
1,811,716	-		MIT1002_01641	0.25	+1.1
1,811,716	-		MIT1002_01641	0.25	-0.7
1,811,784	-		MIT1002_01641	0.40	-2.7
1,811,946	+		MIT1002_01641	0.74	+1.6
1,811,972	+		MIT1002_01641	0.80	-0.6
1,811,977	-		MIT1002_01641	0.81	-0.2
1,812,102	-				-0.2
1,812,112	+				-1.2
1,812,128	+				+0.6
1,812,219	+				-1.3
1,812,236	-				-2.2
1,812,286	+				+1.6
1,812,294	-				+1.9
1,812,387	-		MIT1002_01642	0.13	+1.3
1,812,404	-		MIT1002_01642	0.14	+0.9
1,812,425	+		MIT1002_01642	0.15	+0.5
1,812,433	-		MIT1002_01642	0.15	-1.1
1,812,433	-		MIT1002_01642	0.15	+0.7
1,812,500	-		MIT1002_01642	0.18	-2.1
1,812,515	+		MIT1002_01642	0.19	+0.2
1,812,560	-		MIT1002_01642	0.21	-0.7
1,812,560	-		MIT1002_01642	0.21	+0.2
1,812,570	-		MIT1002_01642	0.21	-1.9
1,812,570	-		MIT1002_01642	0.21	+0.6
1,812,572	+		MIT1002_01642	0.21	-2.4
1,812,578	-		MIT1002_01642	0.21	-0.2
1,812,578	-		MIT1002_01642	0.21	+0.3
1,812,578	-		MIT1002_01642	0.21	+0.7
1,812,578	-		MIT1002_01642	0.21	-1.3
1,812,588	-		MIT1002_01642	0.22	+0.8
1,812,660	+		MIT1002_01642	0.25	-1.9
1,812,701	-		MIT1002_01642	0.27	+0.1
1,812,758	+		MIT1002_01642	0.29	-1.1
1,812,758	+		MIT1002_01642	0.29	-0.4
1,812,828	+		MIT1002_01642	0.32	-2.5
1,812,836	-		MIT1002_01642	0.32	-2.1
1,812,836	-		MIT1002_01642	0.32	+1.5
1,812,923	+		MIT1002_01642	0.36	+3.4
1,812,987	+		MIT1002_01642	0.38	+2.8
1,813,060	+		MIT1002_01642	0.41	+1.1