Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01367

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
1,515,704	+		MIT1002_01366	0.13	-0.8
1,515,712	-		MIT1002_01366	0.13	+1.7
1,515,759	+		MIT1002_01366	0.17	+0.2
1,515,759	+		MIT1002_01366	0.17	+0.6
1,515,767	-		MIT1002_01366	0.18	+0.2
1,515,810	-		MIT1002_01366	0.22	+1.0
1,515,817	+		MIT1002_01366	0.23	-0.6
1,515,836	-		MIT1002_01366	0.24	-0.4
1,515,849	-		MIT1002_01366	0.26	-0.6
1,515,849	-		MIT1002_01366	0.26	-0.5
1,515,939	-		MIT1002_01366	0.34	+1.3
1,515,976	-		MIT1002_01366	0.37	+0.9
1,516,027	+		MIT1002_01366	0.41	-2.0
1,516,069	-		MIT1002_01366	0.45	+0.3
1,516,209	+		MIT1002_01366	0.58	+1.1
1,516,209	+		MIT1002_01366	0.58	-0.2
1,516,217	-		MIT1002_01366	0.59	+0.2
1,516,258	+		MIT1002_01366	0.62	-1.9
1,516,266	-		MIT1002_01366	0.63	+0.7
1,516,395	-		MIT1002_01366	0.74	+0.2
1,516,413	+		MIT1002_01366	0.76	-1.7
1,516,421	+		MIT1002_01366	0.77	+0.4
1,516,448	-		MIT1002_01366	0.79	+1.2
1,516,460	-		MIT1002_01366	0.80	+3.3
1,516,481	-		MIT1002_01366	0.82	+1.4
1,516,495	-		MIT1002_01366	0.83	+1.8
1,516,501	+		MIT1002_01366	0.84	-1.8
1,516,520	+		MIT1002_01366	0.86	-0.8
1,516,578	-				+0.4
1,516,625	-				+3.1
1,516,669	-				+2.2
1,516,884	+		MIT1002_01367	0.33	+1.4
1,516,893	-		MIT1002_01367	0.34	+0.9
1,516,900	-		MIT1002_01367	0.36	+0.4
1,516,942	+		MIT1002_01367	0.42	-0.8
1,516,968	-		MIT1002_01367	0.47	+1.2
1,516,973	+		MIT1002_01367	0.48	-0.5
1,516,981	-		MIT1002_01367	0.49	+1.5
1,516,981	-		MIT1002_01367	0.49	+0.3
1,516,991	+		MIT1002_01367	0.50	+4.0
1,516,992	-		MIT1002_01367	0.51	+0.4
1,517,010	+		MIT1002_01367	0.54	-0.3
1,517,010	+		MIT1002_01367	0.54	-0.8
1,517,018	-		MIT1002_01367	0.55	+0.3
1,517,018	-		MIT1002_01367	0.55	+0.7
1,517,092	+		MIT1002_01367	0.67	-1.4
1,517,136	+		MIT1002_01367	0.74	+0.7
1,517,191	+		MIT1002_01367	0.83	-0.5
1,517,297	+				+0.3
1,517,357	+				-0.8
1,517,567	-				-0.4
1,517,577	+				+1.0
1,517,617	+				+1.0
1,517,617	+				+1.1
1,517,617	+				-1.4
1,517,617	+				+0.8
1,517,625	-				-0.2
1,517,625	-				-1.9
1,517,743	-		MIT1002_01368	0.16	-1.9
1,517,849	+		MIT1002_01368	0.23	-0.1
1,517,887	+		MIT1002_01368	0.25	+1.1
1,517,980	-		MIT1002_01368	0.31	+0.3
1,517,987	-		MIT1002_01368	0.31	-0.9
1,517,990	+		MIT1002_01368	0.31	+0.3
1,518,122	-		MIT1002_01368	0.39	+0.6
1,518,140	+		MIT1002_01368	0.40	+1.2
1,518,150	+		MIT1002_01368	0.41	+1.7
1,518,158	+		MIT1002_01368	0.42	+2.1
1,518,214	+		MIT1002_01368	0.45	+0.3
1,518,214	+		MIT1002_01368	0.45	-1.6
1,518,214	+		MIT1002_01368	0.45	-0.9
1,518,222	-		MIT1002_01368	0.45	+0.3
1,518,222	-		MIT1002_01368	0.45	+1.1
1,518,251	+		MIT1002_01368	0.47	+1.1
1,518,285	-		MIT1002_01368	0.49	-2.1
1,518,291	+		MIT1002_01368	0.50	+1.9