Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01046

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
1,155,734	+		MIT1002_01046	0.17	-0.4
1,155,759	+		MIT1002_01046	0.21	+1.0
1,155,765	-		MIT1002_01046	0.21	-0.1
1,155,773	-		MIT1002_01046	0.22	-0.0
1,155,790	+		MIT1002_01046	0.25	+0.1
1,155,802	+		MIT1002_01046	0.26	+2.2
1,155,812	-		MIT1002_01046	0.28	+0.4
1,156,035	+		MIT1002_01046	0.59	-0.3
1,156,035	+		MIT1002_01046	0.59	-0.7
1,156,065	+		MIT1002_01046	0.63	+0.1
1,156,135	+		MIT1002_01046	0.72	-1.9
1,156,145	-		MIT1002_01046	0.74	+0.7
1,156,153	+		MIT1002_01046	0.75	+0.1
1,156,171	-		MIT1002_01046	0.77	-0.2
1,156,211	+		MIT1002_01046	0.83	-2.8
1,156,219	-		MIT1002_01046	0.84	+0.1
1,156,272	+				-1.1
1,156,338	-				-0.4
1,156,561	+		MIT1002_01047	0.31	-0.7
1,156,569	-		MIT1002_01047	0.33	+0.9
1,156,604	+		MIT1002_01047	0.38	-0.9
1,156,612	-		MIT1002_01047	0.39	+1.5
1,156,628	+		MIT1002_01047	0.41	+1.5
1,156,636	-		MIT1002_01047	0.42	-1.4
1,156,650	-		MIT1002_01047	0.44	-0.5
1,156,761	-		MIT1002_01047	0.61	-1.8
1,156,767	+		MIT1002_01047	0.62	+1.1
1,156,767	+		MIT1002_01047	0.62	-1.2
1,156,775	-		MIT1002_01047	0.63	-1.2
1,156,779	-		MIT1002_01047	0.63	-1.1
1,156,794	-		MIT1002_01047	0.66	-0.7
1,156,799	-		MIT1002_01047	0.66	+1.1
1,156,799	-		MIT1002_01047	0.66	+0.3
1,156,897	-		MIT1002_01047	0.81	-0.1
1,156,897	-		MIT1002_01047	0.81	-1.1
1,156,915	+		MIT1002_01047	0.83	-0.7
1,156,915	+		MIT1002_01047	0.83	-0.4
1,156,977	-				+1.0
1,157,096	-				+1.1
1,157,178	+		MIT1002_01048	0.12	+0.4
1,157,179	+		MIT1002_01048	0.12	-0.2
1,157,187	-		MIT1002_01048	0.12	+0.5
1,157,242	-		MIT1002_01048	0.17	-1.2
1,157,269	-		MIT1002_01048	0.20	-0.3