Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00100

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
107,170	+		MIT1002_00099	0.15	+0.2
107,224	+		MIT1002_00099	0.20	+1.4
107,224	+		MIT1002_00099	0.20	+0.2
107,224	+		MIT1002_00099	0.20	+1.1
107,224	+		MIT1002_00099	0.20	+0.1
107,224	+		MIT1002_00099	0.20	-1.6
107,232	-		MIT1002_00099	0.20	-1.5
107,232	-		MIT1002_00099	0.20	-2.1
107,232	-		MIT1002_00099	0.20	+0.2
107,232	-		MIT1002_00099	0.20	-0.6
107,232	-		MIT1002_00099	0.20	-0.4
107,250	+		MIT1002_00099	0.22	-1.8
107,258	-		MIT1002_00099	0.23	+0.2
107,360	+		MIT1002_00099	0.31	+0.9
107,360	+		MIT1002_00099	0.31	-2.0
107,377	+		MIT1002_00099	0.33	-1.3
107,403	-		MIT1002_00099	0.35	+0.7
107,426	+		MIT1002_00099	0.37	-0.7
107,485	+		MIT1002_00099	0.42	+1.4
107,486	+		MIT1002_00099	0.42	+0.6
107,517	+		MIT1002_00099	0.45	-0.3
107,526	-		MIT1002_00099	0.45	+0.0
107,583	+		MIT1002_00099	0.50	-1.1
107,642	+		MIT1002_00099	0.55	+1.1
107,879	+		MIT1002_00099	0.76	-0.3
107,925	-		MIT1002_00099	0.79	-1.0
107,954	-		MIT1002_00099	0.82	-1.5
107,956	+		MIT1002_00099	0.82	-1.3
107,981	+		MIT1002_00099	0.84	-2.6
107,989	-		MIT1002_00099	0.85	+0.1
108,041	+		MIT1002_00099	0.89	-1.4
108,049	-				-1.8
108,054	+				-3.1
108,062	-				+0.7
108,062	-				+0.5
108,062	-				-0.4
108,062	-				+0.5
108,203	-				-0.4
108,283	+		MIT1002_00100	0.10	-1.3
108,424	-		MIT1002_00100	0.22	-0.7
108,424	-		MIT1002_00100	0.22	-2.4
108,459	-		MIT1002_00100	0.25	-0.2
108,459	-		MIT1002_00100	0.25	-1.0
108,459	-		MIT1002_00100	0.25	+0.4
108,459	-		MIT1002_00100	0.25	-2.3
108,464	+		MIT1002_00100	0.26	+0.4
108,538	-		MIT1002_00100	0.32	+0.5
108,538	-		MIT1002_00100	0.32	-0.9
108,538	-		MIT1002_00100	0.32	-1.3
108,538	-		MIT1002_00100	0.32	-0.4
108,559	+		MIT1002_00100	0.34	+1.1
108,619	+		MIT1002_00100	0.39	-1.4
108,627	-		MIT1002_00100	0.40	-0.1
108,628	-		MIT1002_00100	0.40	-1.0
108,650	+		MIT1002_00100	0.42	-2.0
108,672	+		MIT1002_00100	0.43	-0.8
108,680	-		MIT1002_00100	0.44	-0.3
108,692	+		MIT1002_00100	0.45	-3.8
108,692	+		MIT1002_00100	0.45	-0.7
108,692	+		MIT1002_00100	0.45	-2.1
108,700	+		MIT1002_00100	0.46	-0.0
108,700	-		MIT1002_00100	0.46	+0.7
108,702	+		MIT1002_00100	0.46	-1.2
108,710	-		MIT1002_00100	0.47	+2.9
108,718	-		MIT1002_00100	0.47	+0.4
108,793	-		MIT1002_00100	0.54	-0.6
108,890	-		MIT1002_00100	0.62	-2.3
109,070	-		MIT1002_00100	0.77	-1.2
109,129	+		MIT1002_00100	0.82	-0.9
109,197	-		MIT1002_00100	0.88	-1.7
109,346	+				+0.9
110,098	+				+1.4
110,098	+				+1.4
110,106	-				+0.9
110,106	-				-1.2
110,106	-				-0.2