Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00075

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
79,431	-				+1.7
79,447	+				+0.7
79,463	-				+1.6
79,498	+				+2.9
79,506	-				+0.7
79,721	-		MIT1002_00073	0.15	-0.4
79,742	+		MIT1002_00073	0.20	-0.2
79,742	+		MIT1002_00073	0.20	+0.5
79,798	-		MIT1002_00073	0.34	-0.9
79,903	-		MIT1002_00073	0.60	+0.1
80,116	-				+0.4
80,166	+				-1.0
80,230	-				+0.3
80,235	-				+1.1
80,257	+				+2.1
80,259	+				-0.0
80,301	+				-1.6
80,351	-		MIT1002_00074	0.26	-0.1
80,351	-		MIT1002_00074	0.26	-0.8
80,365	+		MIT1002_00074	0.44	-1.1
80,368	-		MIT1002_00074	0.48	-0.3
80,376	+		MIT1002_00074	0.58	+0.4
80,376	+		MIT1002_00074	0.58	+0.2
80,400	-				-0.9
80,400	-				-1.2
80,432	+				-0.1
80,441	-				-0.5
80,442	+				-1.2
80,456	+				+0.4
80,512	+				-0.4
80,578	-		MIT1002_00075	0.13	+1.9
80,578	-		MIT1002_00075	0.13	+0.2
80,578	-		MIT1002_00075	0.13	+1.4
80,659	+		MIT1002_00075	0.20	-1.7
80,659	+		MIT1002_00075	0.20	+1.3
80,665	-		MIT1002_00075	0.20	-0.5
80,735	-		MIT1002_00075	0.26	-1.2
80,735	-		MIT1002_00075	0.26	+1.4
80,743	-		MIT1002_00075	0.27	+0.5
80,765	+		MIT1002_00075	0.28	-0.4
80,765	+		MIT1002_00075	0.28	-0.4
80,773	-		MIT1002_00075	0.29	-0.1
80,783	-		MIT1002_00075	0.30	+0.2
80,801	-		MIT1002_00075	0.31	+1.1
80,801	-		MIT1002_00075	0.31	-0.0
80,809	-		MIT1002_00075	0.32	+1.1
80,853	+		MIT1002_00075	0.36	+0.8
80,976	+		MIT1002_00075	0.46	+0.7
80,976	+		MIT1002_00075	0.46	+0.4
80,976	+		MIT1002_00075	0.46	-0.5
80,984	-		MIT1002_00075	0.47	+1.8
80,984	-		MIT1002_00075	0.47	+0.5
80,984	-		MIT1002_00075	0.47	+1.4
81,002	-		MIT1002_00075	0.48	+1.4
81,052	+		MIT1002_00075	0.53	-0.5
81,060	+		MIT1002_00075	0.53	+1.1
81,078	-		MIT1002_00075	0.55	+0.3
81,121	-		MIT1002_00075	0.58	-0.6
81,131	+		MIT1002_00075	0.59	-1.1
81,181	-		MIT1002_00075	0.63	-0.5
81,242	-		MIT1002_00075	0.68	+1.7
81,266	+		MIT1002_00075	0.70	-1.4
81,291	+		MIT1002_00075	0.73	-0.7
81,303	+		MIT1002_00075	0.74	-0.4
81,305	-		MIT1002_00075	0.74	-0.0
81,311	-		MIT1002_00075	0.74	+0.5
81,311	-		MIT1002_00075	0.74	-0.9
81,342	+		MIT1002_00075	0.77	-0.3
81,350	-		MIT1002_00075	0.77	+2.0
81,397	+		MIT1002_00075	0.81	+1.2
81,423	+		MIT1002_00075	0.84	+0.7
81,470	+		MIT1002_00075	0.88	-0.6
81,486	+		MIT1002_00075	0.89	-0.1
81,598	+				-1.1
81,606	+				+1.2
81,606	+				-0.8
81,659	+		MIT1002_00076	0.18	-0.5
81,769	+		MIT1002_00076	0.55	-1.5
81,811	+		MIT1002_00076	0.70	-1.0
81,812	+		MIT1002_00076	0.70	-1.4
81,820	+		MIT1002_00076	0.73	+1.1
81,829	+		MIT1002_00076	0.76	-0.4
82,032	+				-1.0
82,045	+				+0.7
82,045	+				-0.3
82,102	+				+0.2
82,102	+				-0.3
82,102	+				-0.6
82,102	+				+0.5
82,102	+				-0.2
82,102	+				-1.0
82,107	+				+0.5
82,110	-				+0.3
82,110	-				+1.0
82,110	-				+1.4
82,110	-				-0.2
82,110	-				+0.9
82,110	-				+0.3
82,110	-				+0.2
82,110	-				+0.9
82,110	-				+0.9
82,110	-				-1.1
82,110	-				+0.4
82,110	-				-1.3
82,110	-				-1.0
82,110	-				-0.5
82,117	+				+1.8
82,235	-				+2.5
82,296	+				+1.5
82,310	-				+0.3
82,369	-		MIT1002_00077	0.12	-0.5
82,408	-		MIT1002_00077	0.15	+0.7
82,413	-		MIT1002_00077	0.15	-0.1
82,413	-		MIT1002_00077	0.15	-0.1
82,445	+		MIT1002_00077	0.17	+0.3
82,512	+		MIT1002_00077	0.22	-2.2
82,527	-		MIT1002_00077	0.23	-1.4
82,569	-		MIT1002_00077	0.26	+1.6
82,572	+		MIT1002_00077	0.26	-0.1
82,610	-		MIT1002_00077	0.29	+1.6
82,613	+		MIT1002_00077	0.29	-0.4
82,616	-		MIT1002_00077	0.30	+1.6
82,616	-		MIT1002_00077	0.30	-1.3