Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00019

Experiment: monoculture; Experiment B, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 5
22,359	+		MIT1002_00018	0.25	-0.1
22,417	-		MIT1002_00018	0.29	+0.1
22,425	+		MIT1002_00018	0.30	-0.5
22,523	+		MIT1002_00018	0.37	+1.8
22,529	+		MIT1002_00018	0.38	+0.4
22,533	-		MIT1002_00018	0.38	+0.6
22,582	+		MIT1002_00018	0.42	+0.3
22,583	+		MIT1002_00018	0.42	+1.9
22,583	+		MIT1002_00018	0.42	-1.3
22,609	-		MIT1002_00018	0.44	+1.4
22,638	+		MIT1002_00018	0.46	+1.4
22,638	+		MIT1002_00018	0.46	-0.4
22,646	-		MIT1002_00018	0.47	+0.7
22,646	-		MIT1002_00018	0.47	+1.9
22,681	+		MIT1002_00018	0.49	+1.1
22,704	+		MIT1002_00018	0.51	+2.5
22,708	+		MIT1002_00018	0.51	+0.8
22,712	-		MIT1002_00018	0.52	+1.6
22,735	-		MIT1002_00018	0.53	+1.6
22,763	-		MIT1002_00018	0.55	-1.4
22,842	+		MIT1002_00018	0.61	-0.3
22,850	-		MIT1002_00018	0.62	+2.1
22,913	+		MIT1002_00018	0.67	-0.7
22,921	-		MIT1002_00018	0.67	-0.1
22,928	+		MIT1002_00018	0.68	+0.1
22,936	-		MIT1002_00018	0.69	+0.1
22,972	+		MIT1002_00018	0.71	+0.7
22,972	+		MIT1002_00018	0.71	-0.5
22,980	-		MIT1002_00018	0.72	+2.4
22,982	+		MIT1002_00018	0.72	-0.3
23,100	-		MIT1002_00018	0.81	+1.8
23,135	+		MIT1002_00018	0.84	+0.6
23,137	+		MIT1002_00018	0.84	-0.2
23,159	-		MIT1002_00018	0.85	-0.5
23,179	+		MIT1002_00018	0.87	+2.5
23,180	+		MIT1002_00018	0.87	+0.5
23,187	-		MIT1002_00018	0.88	+1.3
23,260	-				-0.1
23,304	-				+1.2
23,336	+				-1.3
23,336	+				-0.0
23,344	-				+0.1
23,344	-				-0.0
23,344	-				+0.5
23,350	+				+1.6
23,350	+				+2.1
23,358	-				+1.5
24,375	-		MIT1002_00020	0.12	-0.6
24,845	-				+0.6
24,978	-				-0.6
24,980	+				-0.5
25,066	+				-1.6
25,071	+				-0.5
25,108	+				-0.8
25,108	+				-1.6
25,150	-		MIT1002_00021	0.10	-0.9
25,150	-		MIT1002_00021	0.10	-1.2
25,150	-		MIT1002_00021	0.10	-2.8
25,152	-		MIT1002_00021	0.11	-0.1
25,157	+		MIT1002_00021	0.11	-2.3
25,167	-		MIT1002_00021	0.12	-0.3
25,213	+		MIT1002_00021	0.16	+0.9
25,257	-		MIT1002_00021	0.20	-0.4
25,258	+		MIT1002_00021	0.20	-0.3
25,262	-		MIT1002_00021	0.21	-0.4