Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02785 and QEN71_RS02790 are separated by 462 nucleotides QEN71_RS02790 and QEN71_RS02795 are separated by 201 nucleotides QEN71_RS02795 and QEN71_RS02800 are separated by 486 nucleotides
QEN71_RS02785: QEN71_RS02785 - ornithine carbamoyltransferase, at 623,379 to 624,308
_RS02785
QEN71_RS02790: QEN71_RS02790 - DUF3579 domain-containing protein, at 624,771 to 625,106
_RS02790
QEN71_RS02795: QEN71_RS02795 - 30S ribosomal protein S20, at 625,308 to 625,586
_RS02795
QEN71_RS02800: QEN71_RS02800 - murein biosynthesis integral membrane protein MurJ, at 626,073 to 627,623
_RS02800
Position (kb) 624
625
626 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 623.806 kb on + strand, within QEN71_RS02785 at 623.806 kb on + strand, within QEN71_RS02785 at 623.806 kb on + strand, within QEN71_RS02785 at 623.806 kb on + strand, within QEN71_RS02785 at 623.806 kb on + strand, within QEN71_RS02785 at 623.806 kb on + strand, within QEN71_RS02785 at 623.806 kb on + strand, within QEN71_RS02785 at 623.806 kb on + strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.807 kb on - strand, within QEN71_RS02785 at 623.872 kb on + strand, within QEN71_RS02785 at 623.872 kb on + strand, within QEN71_RS02785 at 623.872 kb on + strand, within QEN71_RS02785 at 623.872 kb on + strand, within QEN71_RS02785 at 623.872 kb on + strand, within QEN71_RS02785 at 623.872 kb on + strand, within QEN71_RS02785 at 623.873 kb on - strand, within QEN71_RS02785 at 623.873 kb on - strand, within QEN71_RS02785 at 623.873 kb on - strand, within QEN71_RS02785 at 623.873 kb on - strand, within QEN71_RS02785 at 623.873 kb on - strand, within QEN71_RS02785 at 623.875 kb on + strand, within QEN71_RS02785 at 623.875 kb on + strand, within QEN71_RS02785 at 623.875 kb on + strand, within QEN71_RS02785 at 623.875 kb on + strand, within QEN71_RS02785 at 623.875 kb on + strand, within QEN71_RS02785 at 623.876 kb on - strand, within QEN71_RS02785 at 623.876 kb on - strand, within QEN71_RS02785 at 623.876 kb on - strand, within QEN71_RS02785 at 623.876 kb on - strand, within QEN71_RS02785 at 623.911 kb on + strand, within QEN71_RS02785 at 623.912 kb on - strand, within QEN71_RS02785 at 623.912 kb on - strand, within QEN71_RS02785 at 623.988 kb on - strand, within QEN71_RS02785 at 623.988 kb on - strand, within QEN71_RS02785 at 623.988 kb on - strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.190 kb on + strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.191 kb on - strand, within QEN71_RS02785 at 624.199 kb on + strand, within QEN71_RS02785 at 624.199 kb on + strand, within QEN71_RS02785 at 624.199 kb on + strand, within QEN71_RS02785 at 624.199 kb on + strand, within QEN71_RS02785 at 624.199 kb on + strand, within QEN71_RS02785 at 624.199 kb on + strand, within QEN71_RS02785 at 624.200 kb on - strand, within QEN71_RS02785 at 624.200 kb on - strand, within QEN71_RS02785 at 624.200 kb on - strand, within QEN71_RS02785 at 624.244 kb on + strand at 624.244 kb on + strand at 624.244 kb on + strand at 624.244 kb on + strand at 624.244 kb on + strand at 624.244 kb on + strand at 624.244 kb on + strand at 624.244 kb on + strand at 624.245 kb on - strand at 624.245 kb on - strand at 624.245 kb on - strand at 624.245 kb on - strand at 624.250 kb on + strand at 624.250 kb on + strand at 624.251 kb on - strand at 624.251 kb on - strand at 624.283 kb on + strand at 624.283 kb on + strand at 624.283 kb on + strand at 624.284 kb on - strand at 624.284 kb on - strand at 624.294 kb on - strand at 624.308 kb on + strand at 624.308 kb on + strand at 624.308 kb on + strand at 624.309 kb on - strand at 624.309 kb on - strand at 624.309 kb on - strand at 624.309 kb on - strand at 624.317 kb on + strand at 624.317 kb on + strand at 624.317 kb on + strand at 624.317 kb on + strand at 624.318 kb on - strand at 624.318 kb on - strand at 624.371 kb on - strand at 624.371 kb on - strand at 624.371 kb on - strand at 624.371 kb on - strand at 624.385 kb on + strand at 624.385 kb on + strand at 624.385 kb on + strand at 624.385 kb on + strand at 624.385 kb on + strand at 624.385 kb on + strand at 624.386 kb on - strand at 624.499 kb on + strand at 624.500 kb on - strand at 624.500 kb on - strand at 624.501 kb on + strand at 624.540 kb on + strand at 624.540 kb on + strand at 624.540 kb on + strand at 624.540 kb on + strand at 624.540 kb on + strand at 624.584 kb on + strand at 624.584 kb on + strand at 624.584 kb on + strand at 624.584 kb on + strand at 624.584 kb on + strand at 624.659 kb on + strand at 624.659 kb on + strand at 624.659 kb on + strand at 624.659 kb on + strand at 624.659 kb on + strand at 624.715 kb on + strand at 625.310 kb on - strand at 626.058 kb on + strand at 626.058 kb on + strand at 626.058 kb on + strand at 626.058 kb on + strand at 626.058 kb on + strand at 626.058 kb on + strand at 626.059 kb on - strand at 626.059 kb on - strand at 626.059 kb on - strand at 626.059 kb on - strand at 626.059 kb on - strand at 626.060 kb on + strand at 626.060 kb on + strand at 626.060 kb on + strand at 626.060 kb on + strand at 626.060 kb on + strand at 626.060 kb on + strand at 626.060 kb on + strand at 626.060 kb on + strand at 626.063 kb on + strand at 626.063 kb on + strand at 626.063 kb on + strand at 626.063 kb on + strand at 626.063 kb on + strand at 626.063 kb on + strand at 626.063 kb on + strand at 626.063 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 623,806 + QEN71_RS02785 0.46 -1.7 623,806 + QEN71_RS02785 0.46 -3.4 623,806 + QEN71_RS02785 0.46 -3.0 623,806 + QEN71_RS02785 0.46 -3.8 623,806 + QEN71_RS02785 0.46 -1.3 623,806 + QEN71_RS02785 0.46 -2.0 623,806 + QEN71_RS02785 0.46 -3.1 623,806 + QEN71_RS02785 0.46 -3.6 623,807 - QEN71_RS02785 0.46 -1.0 623,807 - QEN71_RS02785 0.46 -3.5 623,807 - QEN71_RS02785 0.46 -3.8 623,807 - QEN71_RS02785 0.46 -3.2 623,807 - QEN71_RS02785 0.46 -0.3 623,807 - QEN71_RS02785 0.46 -0.3 623,807 - QEN71_RS02785 0.46 -2.9 623,807 - QEN71_RS02785 0.46 -2.3 623,807 - QEN71_RS02785 0.46 -4.0 623,807 - QEN71_RS02785 0.46 -1.4 623,872 + QEN71_RS02785 0.53 -2.7 623,872 + QEN71_RS02785 0.53 -1.1 623,872 + QEN71_RS02785 0.53 -4.1 623,872 + QEN71_RS02785 0.53 -2.7 623,872 + QEN71_RS02785 0.53 -3.7 623,872 + QEN71_RS02785 0.53 -0.1 623,873 - QEN71_RS02785 0.53 -2.2 623,873 - QEN71_RS02785 0.53 -5.2 623,873 - QEN71_RS02785 0.53 -3.4 623,873 - QEN71_RS02785 0.53 -0.3 623,873 - QEN71_RS02785 0.53 -3.3 623,875 + QEN71_RS02785 0.53 -2.2 623,875 + QEN71_RS02785 0.53 -2.9 623,875 + QEN71_RS02785 0.53 -2.9 623,875 + QEN71_RS02785 0.53 -4.2 623,875 + QEN71_RS02785 0.53 -1.5 623,876 - QEN71_RS02785 0.53 -3.9 623,876 - QEN71_RS02785 0.53 -3.5 623,876 - QEN71_RS02785 0.53 -2.3 623,876 - QEN71_RS02785 0.53 -4.5 623,911 + QEN71_RS02785 0.57 -1.1 623,912 - QEN71_RS02785 0.57 -4.3 623,912 - QEN71_RS02785 0.57 -2.8 623,988 - QEN71_RS02785 0.65 -4.6 623,988 - QEN71_RS02785 0.65 -3.1 623,988 - QEN71_RS02785 0.65 -4.0 624,190 + QEN71_RS02785 0.87 -2.7 624,190 + QEN71_RS02785 0.87 -4.2 624,190 + QEN71_RS02785 0.87 -2.5 624,190 + QEN71_RS02785 0.87 -0.3 624,190 + QEN71_RS02785 0.87 -1.3 624,190 + QEN71_RS02785 0.87 -4.4 624,190 + QEN71_RS02785 0.87 -1.0 624,190 + QEN71_RS02785 0.87 -1.7 624,190 + QEN71_RS02785 0.87 -1.0 624,191 - QEN71_RS02785 0.87 -2.8 624,191 - QEN71_RS02785 0.87 +0.0 624,191 - QEN71_RS02785 0.87 -4.0 624,191 - QEN71_RS02785 0.87 -2.5 624,191 - QEN71_RS02785 0.87 -4.0 624,191 - QEN71_RS02785 0.87 +0.5 624,191 - QEN71_RS02785 0.87 -3.0 624,191 - QEN71_RS02785 0.87 -1.5 624,191 - QEN71_RS02785 0.87 -4.4 624,191 - QEN71_RS02785 0.87 -2.3 624,191 - QEN71_RS02785 0.87 +0.0 624,191 - QEN71_RS02785 0.87 +0.0 624,191 - QEN71_RS02785 0.87 +0.0 624,191 - QEN71_RS02785 0.87 +0.0 624,191 - QEN71_RS02785 0.87 -1.1 624,191 - QEN71_RS02785 0.87 -3.3 624,191 - QEN71_RS02785 0.87 -0.8 624,191 - QEN71_RS02785 0.87 -3.3 624,191 - QEN71_RS02785 0.87 -0.3 624,191 - QEN71_RS02785 0.87 -2.5 624,199 + QEN71_RS02785 0.88 -1.5 624,199 + QEN71_RS02785 0.88 -0.8 624,199 + QEN71_RS02785 0.88 -2.2 624,199 + QEN71_RS02785 0.88 -5.5 624,199 + QEN71_RS02785 0.88 -0.8 624,199 + QEN71_RS02785 0.88 -2.7 624,200 - QEN71_RS02785 0.88 -3.2 624,200 - QEN71_RS02785 0.88 -2.7 624,200 - QEN71_RS02785 0.88 -2.1 624,244 + -1.6 624,244 + -4.4 624,244 + -3.9 624,244 + -3.6 624,244 + -1.3 624,244 + -3.2 624,244 + -2.4 624,244 + +0.0 624,245 - -1.7 624,245 - -2.7 624,245 - -1.0 624,245 - -3.0 624,250 + -4.5 624,250 + -0.3 624,251 - -1.8 624,251 - -2.5 624,283 + -1.8 624,283 + -3.9 624,283 + -2.4 624,284 - -3.1 624,284 - -1.7 624,294 - -5.1 624,308 + -2.7 624,308 + -5.0 624,308 + -4.2 624,309 - -0.3 624,309 - -1.7 624,309 - +1.9 624,309 - -0.6 624,317 + -1.0 624,317 + -0.1 624,317 + -1.5 624,317 + -1.6 624,318 - +0.6 624,318 - -1.2 624,371 - -1.8 624,371 - -0.5 624,371 - -1.0 624,371 - +1.0 624,385 + +1.2 624,385 + +0.3 624,385 + -1.1 624,385 + -1.1 624,385 + -2.8 624,385 + -0.4 624,386 - +0.2 624,499 + -0.5 624,500 - +3.0 624,500 - +0.8 624,501 + +0.0 624,540 + -0.4 624,540 + -0.7 624,540 + +1.0 624,540 + -0.4 624,540 + -1.9 624,584 + +0.1 624,584 + -0.2 624,584 + -0.5 624,584 + +0.9 624,584 + -0.1 624,659 + +1.4 624,659 + +0.4 624,659 + -1.0 624,659 + +0.0 624,659 + +1.3 624,715 + +0.1 625,310 - +0.1 626,058 + +0.8 626,058 + +1.8 626,058 + -0.4 626,058 + -0.5 626,058 + +0.2 626,058 + -0.1 626,059 - -0.1 626,059 - +0.5 626,059 - -0.5 626,059 - -0.8 626,059 - -0.6 626,060 + -0.1 626,060 + +0.4 626,060 + +0.4 626,060 + +0.0 626,060 + +0.7 626,060 + +0.1 626,060 + -1.8 626,060 + -0.5 626,063 + -0.8 626,063 + -1.8 626,063 + +0.9 626,063 + +0.7 626,063 + -0.5 626,063 + +0.5 626,063 + +0.0 626,063 + -0.8
Or see this region's nucleotide sequence