Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04037

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
4,523,572	+				+0.4
4,523,695	-				+0.8
4,523,782	+		MIT1002_04036	0.17	+0.5
4,523,859	-		MIT1002_04036	0.30	-1.1
4,523,886	-		MIT1002_04036	0.34	-1.0
4,524,015	-		MIT1002_04036	0.54	-3.3
4,524,054	-		MIT1002_04036	0.61	-3.3
4,524,361	-				-2.7
4,524,391	-				-0.1
4,524,463	-				+0.5
4,524,473	+				-0.7
4,524,481	-				+0.2
4,524,514	+				-0.2
4,524,522	-				-0.0
4,524,522	-				-0.2
4,524,522	-				+0.6
4,524,542	-				-1.6
4,524,637	+				-1.5
4,524,671	-				+0.7
4,524,676	-				-1.4
4,524,688	+				+0.3
4,524,696	+				+1.3
4,524,706	-				-2.2
4,524,893	-		MIT1002_04037	0.13	-0.9
4,524,893	-		MIT1002_04037	0.13	-1.7
4,524,898	-		MIT1002_04037	0.14	-1.3
4,524,911	-		MIT1002_04037	0.14	-0.2
4,525,093	-		MIT1002_04037	0.19	+0.2
4,525,137	+		MIT1002_04037	0.20	+0.0
4,525,152	+		MIT1002_04037	0.21	-0.3
4,525,152	+		MIT1002_04037	0.21	+0.2
4,525,152	+		MIT1002_04037	0.21	-0.0
4,525,152	+		MIT1002_04037	0.21	-1.4
4,525,152	+		MIT1002_04037	0.21	+0.2
4,525,160	-		MIT1002_04037	0.21	+0.0
4,525,201	+		MIT1002_04037	0.22	-0.8
4,525,204	-		MIT1002_04037	0.22	-1.6
4,525,246	+		MIT1002_04037	0.23	+0.3
4,525,246	+		MIT1002_04037	0.23	+0.0
4,525,246	+		MIT1002_04037	0.23	+1.1
4,525,246	+		MIT1002_04037	0.23	+1.6
4,525,246	+		MIT1002_04037	0.23	+0.6
4,525,246	+		MIT1002_04037	0.23	-1.5
4,525,246	+		MIT1002_04037	0.23	-0.8
4,525,246	+		MIT1002_04037	0.23	+0.4
4,525,246	+		MIT1002_04037	0.23	-0.6
4,525,254	-		MIT1002_04037	0.24	+1.4
4,525,254	-		MIT1002_04037	0.24	-1.1
4,525,254	-		MIT1002_04037	0.24	-1.3
4,525,254	-		MIT1002_04037	0.24	+1.4
4,525,254	-		MIT1002_04037	0.24	+0.2
4,525,254	-		MIT1002_04037	0.24	+0.4
4,525,254	-		MIT1002_04037	0.24	-1.0
4,525,265	+		MIT1002_04037	0.24	+0.6
4,525,374	+		MIT1002_04037	0.27	-0.8
4,525,426	-		MIT1002_04037	0.28	-1.7
4,525,469	+		MIT1002_04037	0.30	+0.1
4,525,487	-		MIT1002_04037	0.30	-0.1
4,525,497	-		MIT1002_04037	0.30	+1.1
4,525,544	+		MIT1002_04037	0.32	+1.8
4,525,590	+		MIT1002_04037	0.33	+0.8
4,525,590	+		MIT1002_04037	0.33	-1.8
4,525,597	-		MIT1002_04037	0.33	+0.7
4,525,598	-		MIT1002_04037	0.33	+0.5
4,525,598	-		MIT1002_04037	0.33	-0.8
4,525,714	+		MIT1002_04037	0.37	+1.5
4,525,722	-		MIT1002_04037	0.37	-0.4
4,525,913	-		MIT1002_04037	0.42	-0.5
4,525,955	+		MIT1002_04037	0.43	-0.1
4,525,955	+		MIT1002_04037	0.43	-0.7
4,525,960	+		MIT1002_04037	0.43	+0.7
4,525,963	-		MIT1002_04037	0.44	-0.2
4,525,965	-		MIT1002_04037	0.44	-0.3
4,525,970	+		MIT1002_04037	0.44	+0.2
4,526,046	+		MIT1002_04037	0.46	+0.3
4,526,132	+		MIT1002_04037	0.48	+2.3
4,526,311	+		MIT1002_04037	0.53	-0.8
4,526,327	-		MIT1002_04037	0.54	+1.1
4,526,366	+		MIT1002_04037	0.55	+0.8
4,526,366	+		MIT1002_04037	0.55	+0.8
4,526,374	-		MIT1002_04037	0.55	+1.5
4,526,374	-		MIT1002_04037	0.55	-1.1
4,526,374	-		MIT1002_04037	0.55	+0.2
4,526,387	+		MIT1002_04037	0.55	+0.8
4,526,395	-		MIT1002_04037	0.56	+1.8
4,526,452	-		MIT1002_04037	0.57	-0.4
4,526,452	-		MIT1002_04037	0.57	-0.3
4,526,452	-		MIT1002_04037	0.57	-0.6
4,526,479	-		MIT1002_04037	0.58	+0.1
4,526,513	+		MIT1002_04037	0.59	+3.2
4,526,578	+		MIT1002_04037	0.61	+0.4
4,526,578	+		MIT1002_04037	0.61	-0.6
4,526,596	-		MIT1002_04037	0.61	-1.5
4,526,646	+		MIT1002_04037	0.63	-0.3
4,526,708	-		MIT1002_04037	0.64	+1.1
4,526,716	+		MIT1002_04037	0.65	-0.2
4,526,716	+		MIT1002_04037	0.65	-2.0
4,526,716	+		MIT1002_04037	0.65	+0.7
4,526,716	+		MIT1002_04037	0.65	-0.1
4,526,724	-		MIT1002_04037	0.65	-2.1
4,526,724	-		MIT1002_04037	0.65	+1.2
4,526,724	-		MIT1002_04037	0.65	+0.5
4,526,724	-		MIT1002_04037	0.65	-1.3
4,526,724	-		MIT1002_04037	0.65	+0.4
4,526,759	+		MIT1002_04037	0.66	-0.1
4,526,759	+		MIT1002_04037	0.66	+0.3
4,526,767	-		MIT1002_04037	0.66	+0.2
4,526,769	+		MIT1002_04037	0.66	-1.2
4,526,779	+		MIT1002_04037	0.66	+0.5
4,526,812	-		MIT1002_04037	0.67	+1.6
4,526,817	-		MIT1002_04037	0.68	-0.3
4,526,817	-		MIT1002_04037	0.68	+0.7
4,526,817	-		MIT1002_04037	0.68	+0.7
4,526,848	+		MIT1002_04037	0.68	-0.4
4,526,909	+		MIT1002_04037	0.70	+0.4
4,526,909	+		MIT1002_04037	0.70	+0.3
4,526,917	-		MIT1002_04037	0.70	-1.2
4,526,917	-		MIT1002_04037	0.70	+2.7
4,526,927	-		MIT1002_04037	0.71	-0.1
4,527,011	+		MIT1002_04037	0.73	-0.5
4,527,019	-		MIT1002_04037	0.73	+0.2
4,527,034	+		MIT1002_04037	0.74	+1.9
4,527,035	+		MIT1002_04037	0.74	+0.4
4,527,035	+		MIT1002_04037	0.74	-0.0
4,527,035	+		MIT1002_04037	0.74	-1.5
4,527,035	+		MIT1002_04037	0.74	+1.5
4,527,043	-		MIT1002_04037	0.74	+0.4
4,527,043	-		MIT1002_04037	0.74	-0.3
4,527,103	+		MIT1002_04037	0.76	+1.7
4,527,172	+		MIT1002_04037	0.77	-0.2
4,527,180	-		MIT1002_04037	0.78	-1.1
4,527,232	+		MIT1002_04037	0.79	-0.6
4,527,232	+		MIT1002_04037	0.79	+0.3
4,527,305	-		MIT1002_04037	0.81	+0.7
4,527,310	+		MIT1002_04037	0.81	-0.5
4,527,325	-		MIT1002_04037	0.82	+0.1
4,527,348	+		MIT1002_04037	0.82	-0.5
4,527,413	-		MIT1002_04037	0.84	+1.4
4,527,414	+		MIT1002_04037	0.84	+1.2
4,527,418	-		MIT1002_04037	0.84	+0.8
4,527,422	-		MIT1002_04037	0.84	-2.6
4,527,463	-		MIT1002_04037	0.86	+0.2
4,527,463	-		MIT1002_04037	0.86	+0.5
4,527,471	+		MIT1002_04037	0.86	+0.2
4,527,529	+		MIT1002_04037	0.88	-0.2
4,527,541	+		MIT1002_04037	0.88	+1.3
4,527,580	-		MIT1002_04037	0.89	-0.3
4,527,600	+		MIT1002_04037	0.89	+2.2
4,527,608	+		MIT1002_04037	0.90	-0.8
4,527,650	+				-0.7
4,527,658	-				+1.2
4,527,675	-				-0.1
4,527,675	-				-0.1
4,527,687	+				-0.4
4,527,695	-				-0.3
4,527,719	+				+2.3
4,527,719	-				-1.1
4,527,726	-				+0.2
4,527,727	-				+0.5
4,527,727	-				+0.6
4,527,727	-				+1.6
4,527,742	-				+1.2
4,527,765	+				+0.4
4,527,775	+				+0.0
4,527,788	-				-0.2
4,527,808	-				-1.8
4,527,811	+				-0.9
4,527,819	-				+1.2
4,527,824	-				-0.0
4,527,859	+				+0.3
4,527,861	+				-2.2
4,527,869	-				-0.7
4,528,026	-				+0.5
4,528,096	+				+1.1
4,528,132	+				-1.4
4,528,134	-				+0.5
4,528,140	-				-0.1
4,528,186	+				+0.4
4,528,186	+				+0.7
4,528,186	+				-0.6
4,528,186	+				-0.3
4,528,186	+				+1.5
4,528,186	+				-0.3
4,528,187	-				+0.7
4,528,191	+				+0.6
4,528,194	-				+1.5
4,528,194	-				-1.2
4,528,194	-				-1.2
4,528,194	-				-1.4
4,528,197	-				-1.6
4,528,197	-				-2.4
4,528,199	-				-0.8
4,528,199	-				+1.5
4,528,199	-				-0.9
4,528,210	+				+0.2
4,528,210	+				+1.1
4,528,324	+				+0.4
4,528,336	+				-1.7
4,528,336	+				-0.6
4,528,336	+				+0.2
4,528,337	-				+0.1
4,528,344	-				-2.0
4,528,372	+				-2.1
4,528,402	-		MIT1002_04038	0.11	+1.7
4,528,496	-		MIT1002_04038	0.15	+0.5
4,528,657	+		MIT1002_04038	0.22	-0.8
4,528,665	-		MIT1002_04038	0.23	-0.5
4,528,673	+		MIT1002_04038	0.23	-0.2
4,528,681	+		MIT1002_04038	0.23	+0.0
4,528,681	+		MIT1002_04038	0.23	-0.2
4,528,681	-		MIT1002_04038	0.23	-2.1
4,528,684	-		MIT1002_04038	0.24	+0.4
4,528,686	+		MIT1002_04038	0.24	+0.6
4,528,689	-		MIT1002_04038	0.24	-2.1
4,528,689	-		MIT1002_04038	0.24	-0.5
4,528,689	-		MIT1002_04038	0.24	+1.7
4,528,689	-		MIT1002_04038	0.24	-0.3
4,528,694	-		MIT1002_04038	0.24	+0.4
4,528,749	-		MIT1002_04038	0.26	+1.8
4,528,782	-		MIT1002_04038	0.28	-0.6
4,528,791	-		MIT1002_04038	0.28	-0.1
4,528,806	-		MIT1002_04038	0.29	-0.7
4,528,849	+		MIT1002_04038	0.31	-0.7
4,528,855	+		MIT1002_04038	0.31	+0.1
4,528,855	+		MIT1002_04038	0.31	+0.2
4,528,863	-		MIT1002_04038	0.31	-1.8
4,528,892	-		MIT1002_04038	0.33	-1.0