Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03531

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,950,212	-		MIT1002_03530	0.40	+0.4
3,950,320	-		MIT1002_03530	0.47	+0.7
3,950,355	-		MIT1002_03530	0.49	-0.6
3,950,386	+		MIT1002_03530	0.51	-0.3
3,950,522	+		MIT1002_03530	0.60	-0.7
3,950,530	-		MIT1002_03530	0.60	+0.4
3,950,530	-		MIT1002_03530	0.60	-0.9
3,950,530	-		MIT1002_03530	0.60	+0.9
3,950,532	-		MIT1002_03530	0.60	-0.5
3,950,748	+		MIT1002_03530	0.74	+1.2
3,950,758	+		MIT1002_03530	0.74	-0.4
3,950,758	+		MIT1002_03530	0.74	-0.6
3,950,758	+		MIT1002_03530	0.74	+0.7
3,950,766	-		MIT1002_03530	0.75	+0.1
3,950,766	-		MIT1002_03530	0.75	+0.5
3,950,822	-		MIT1002_03530	0.78	-2.8
3,950,932	-		MIT1002_03530	0.85	-0.6
3,951,043	-				-0.1
3,951,043	-				+3.5
3,951,107	+				-0.2
3,951,122	-				+0.8
3,951,182	+				+1.9
3,951,196	+				-0.3
3,951,230	-		MIT1002_03531	0.29	-0.0
3,951,249	+		MIT1002_03531	0.40	-0.5
3,951,269	+		MIT1002_03531	0.51	+0.1
3,951,272	-		MIT1002_03531	0.53	-1.3
3,951,295	-		MIT1002_03531	0.66	-0.2
3,951,535	+				+0.2
3,951,627	-				-0.6
3,951,634	-				-1.0
3,951,758	+				+1.1
3,951,758	+				+0.1
3,951,758	+				-0.1
3,951,766	-		MIT1002_03532	0.10	-0.1
3,951,766	-		MIT1002_03532	0.10	-0.0
3,951,766	-		MIT1002_03532	0.10	-0.3
3,951,766	-		MIT1002_03532	0.10	-0.1
3,951,778	+		MIT1002_03532	0.11	-0.8
3,951,778	+		MIT1002_03532	0.11	-0.3
3,951,786	-		MIT1002_03532	0.12	-1.1
3,951,786	-		MIT1002_03532	0.12	-0.5
3,951,786	-		MIT1002_03532	0.12	+1.1
3,951,786	-		MIT1002_03532	0.12	+1.9
3,951,786	-		MIT1002_03532	0.12	-0.5
3,951,786	-		MIT1002_03532	0.12	-0.1
3,951,813	+		MIT1002_03532	0.14	+0.6
3,951,856	+		MIT1002_03532	0.17	+0.2
3,951,864	-		MIT1002_03532	0.17	+0.5
3,951,923	-		MIT1002_03532	0.22	-1.1
3,951,970	+		MIT1002_03532	0.25	-0.3
3,951,970	+		MIT1002_03532	0.25	-0.7
3,951,978	-		MIT1002_03532	0.26	-0.2
3,951,978	-		MIT1002_03532	0.26	+0.6
3,951,982	+		MIT1002_03532	0.26	-1.9
3,951,990	-		MIT1002_03532	0.27	+0.2
3,951,990	-		MIT1002_03532	0.27	+0.3
3,952,019	+		MIT1002_03532	0.29	-0.3
3,952,019	+		MIT1002_03532	0.29	+0.3
3,952,019	+		MIT1002_03532	0.29	+1.4
3,952,040	+		MIT1002_03532	0.30	-0.2
3,952,103	+		MIT1002_03532	0.35	-1.2
3,952,103	+		MIT1002_03532	0.35	-0.5
3,952,103	+		MIT1002_03532	0.35	-0.8
3,952,103	+		MIT1002_03532	0.35	-0.1
3,952,103	+		MIT1002_03532	0.35	+0.6
3,952,111	-		MIT1002_03532	0.36	+2.8
3,952,111	-		MIT1002_03532	0.36	-0.3
3,952,111	-		MIT1002_03532	0.36	+1.1
3,952,111	-		MIT1002_03532	0.36	+1.0
3,952,111	-		MIT1002_03532	0.36	-0.8
3,952,118	-		MIT1002_03532	0.36	+0.4
3,952,123	-		MIT1002_03532	0.37	+0.2
3,952,183	-		MIT1002_03532	0.41	+1.0
3,952,323	+		MIT1002_03532	0.51	+0.0
3,952,347	+		MIT1002_03532	0.53	-0.6