Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03442

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,847,754	+		MIT1002_03440	0.69	-1.6
3,847,754	+		MIT1002_03440	0.69	-0.0
3,847,754	+		MIT1002_03440	0.69	-1.9
3,847,762	-		MIT1002_03440	0.71	-1.0
3,847,948	+				-0.0
3,847,954	-				-3.1
3,847,954	-				+0.4
3,847,954	-				-2.6
3,847,964	-				+0.5
3,848,092	+				+0.5
3,848,170	+				+0.6
3,848,170	+				-0.8
3,848,184	+				-0.1
3,848,222	+				-0.3
3,848,222	+				-0.1
3,848,230	-				-1.4
3,848,237	-				+1.0
3,848,315	-		MIT1002_03441	0.18	-0.3
3,848,383	-		MIT1002_03441	0.32	-1.2
3,848,548	+		MIT1002_03441	0.66	-1.8
3,848,556	-		MIT1002_03441	0.68	-0.2
3,848,558	-		MIT1002_03441	0.68	-0.4
3,848,886	+		MIT1002_03442	0.19	+0.8
3,848,886	+		MIT1002_03442	0.19	-0.4
3,848,972	+		MIT1002_03442	0.30	-2.4
3,848,973	+		MIT1002_03442	0.30	+0.3
3,849,028	+		MIT1002_03442	0.37	-0.4
3,849,033	+		MIT1002_03442	0.37	-0.1
3,849,038	-		MIT1002_03442	0.38	-1.2
3,849,040	-		MIT1002_03442	0.38	-1.6
3,849,087	+		MIT1002_03442	0.44	-1.4
3,849,104	+		MIT1002_03442	0.46	+0.3
3,849,213	+		MIT1002_03442	0.59	-0.4
3,849,213	+		MIT1002_03442	0.59	-0.9
3,849,221	-		MIT1002_03442	0.60	+0.3
3,849,221	-		MIT1002_03442	0.60	+0.9
3,849,285	+		MIT1002_03442	0.68	-1.2
3,849,305	+		MIT1002_03442	0.71	-0.3
3,849,367	-		MIT1002_03442	0.78	+0.1
3,849,369	+		MIT1002_03442	0.78	+0.3
3,849,369	+		MIT1002_03442	0.78	-0.0
3,849,377	-		MIT1002_03442	0.79	-0.3
3,849,377	-		MIT1002_03442	0.79	+0.8
3,849,481	+				-0.4
3,849,483	+				+0.0
3,849,483	+				-0.5
3,849,483	+				-0.3
3,849,483	+				-1.1
3,849,483	+				-0.5
3,849,484	-				-0.3
3,849,489	-				-2.0
3,849,491	-				-0.3
3,849,491	-				-1.0
3,849,503	+				-0.6
3,849,550	+				-1.5
3,849,560	+				+1.9
3,849,560	+				-0.2
3,849,568	-				-0.6
3,849,608	-				+0.1
3,849,643	+				-0.1
3,849,663	-				+1.3
3,849,664	-				+0.4
3,849,707	+				-0.5
3,849,816	-		MIT1002_03443	0.21	+0.7
3,849,862	-		MIT1002_03443	0.28	-2.1
3,849,866	+		MIT1002_03443	0.29	-0.3
3,849,866	+		MIT1002_03443	0.29	+1.5
3,849,978	-		MIT1002_03443	0.47	-0.3
3,850,001	-		MIT1002_03443	0.50	-1.3
3,850,083	+		MIT1002_03443	0.64	-0.6
3,850,086	+		MIT1002_03443	0.64	+0.7
3,850,089	-		MIT1002_03443	0.65	+1.6
3,850,094	-		MIT1002_03443	0.65	+0.3
3,850,225	-		MIT1002_03443	0.86	-1.2
3,850,253	+				-0.4
3,850,295	-				+0.5
3,850,359	-				-0.0
3,850,412	+				+0.7
3,850,412	+				+0.1
3,850,422	+				-0.0
3,850,430	-				+0.4
3,850,442	+				+0.6
3,850,444	+				-0.9