Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03259

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,630,213	+		MIT1002_03257	0.81	+0.2
3,630,213	+		MIT1002_03257	0.81	+0.2
3,630,247	+		MIT1002_03257	0.85	+0.7
3,630,255	-		MIT1002_03257	0.86	+0.2
3,630,349	+				-2.0
3,630,354	+				+0.1
3,630,354	+				+0.4
3,630,362	-				+0.9
3,630,362	-				+0.5
3,630,403	+				-0.2
3,630,413	-				+1.8
3,630,484	-				-0.0
3,630,542	+				-0.6
3,630,544	+				-0.6
3,630,552	-				-0.0
3,630,558	-				+0.1
3,630,595	+		MIT1002_03258	0.14	-0.6
3,630,595	+		MIT1002_03258	0.14	+0.3
3,630,612	-		MIT1002_03258	0.17	+1.2
3,630,621	-		MIT1002_03258	0.18	+0.3
3,630,781	-		MIT1002_03258	0.42	-0.1
3,630,853	+		MIT1002_03258	0.53	+1.0
3,630,898	+		MIT1002_03258	0.60	-0.4
3,630,906	-		MIT1002_03258	0.61	-1.6
3,630,919	+		MIT1002_03258	0.63	-1.0
3,630,939	+		MIT1002_03258	0.66	-1.1
3,630,939	+		MIT1002_03258	0.66	+0.4
3,630,998	-		MIT1002_03258	0.75	+0.8
3,631,019	+		MIT1002_03258	0.78	-0.8
3,631,045	+		MIT1002_03258	0.82	+0.6
3,631,053	-		MIT1002_03258	0.83	+0.3
3,631,074	-		MIT1002_03258	0.86	+0.9
3,631,160	-				+0.6
3,631,214	-				-0.0
3,631,225	+				+0.9
3,631,248	+				+2.0
3,631,248	+				+0.6
3,631,248	+				-0.1
3,631,297	+				+0.4
3,631,300	-				-0.1
3,631,331	-		MIT1002_03259	0.12	+0.3
3,631,331	-		MIT1002_03259	0.12	-0.5
3,631,331	-		MIT1002_03259	0.12	-1.4
3,631,364	-		MIT1002_03259	0.15	+1.6
3,631,457	+		MIT1002_03259	0.22	-1.2
3,631,467	+		MIT1002_03259	0.22	-0.5
3,631,469	-		MIT1002_03259	0.23	+0.0
3,631,551	+		MIT1002_03259	0.29	-1.0
3,631,621	+		MIT1002_03259	0.34	-2.0
3,631,646	-		MIT1002_03259	0.36	-1.0
3,631,682	-		MIT1002_03259	0.39	+0.5
3,631,693	+		MIT1002_03259	0.39	-0.0
3,631,775	-		MIT1002_03259	0.46	-0.3
3,631,782	+		MIT1002_03259	0.46	+2.5
3,631,838	+		MIT1002_03259	0.50	+0.7
3,631,889	+		MIT1002_03259	0.54	-0.1
3,631,968	+		MIT1002_03259	0.60	-2.5
3,632,020	+		MIT1002_03259	0.64	-0.2
3,632,054	+		MIT1002_03259	0.67	-0.8
3,632,061	+		MIT1002_03259	0.67	-1.1
3,632,061	+		MIT1002_03259	0.67	-0.2
3,632,099	+		MIT1002_03259	0.70	-0.4
3,632,099	+		MIT1002_03259	0.70	+1.5
3,632,099	+		MIT1002_03259	0.70	+0.7
3,632,099	+		MIT1002_03259	0.70	-0.5
3,632,107	-		MIT1002_03259	0.71	-0.3
3,632,107	-		MIT1002_03259	0.71	-0.1
3,632,153	+		MIT1002_03259	0.74	-0.8
3,632,310	-		MIT1002_03259	0.86	+0.4
3,632,379	-				+0.3
3,632,398	+				+1.2
3,632,447	-				-2.3
3,632,472	-				+1.0
3,632,499	-				-0.1
3,632,534	+				-1.5
3,632,551	-				+0.5
3,632,590	-				-0.3
3,632,633	+				+1.0
3,632,633	+				-0.6
3,632,633	+				-1.1
3,632,633	+				+0.1
3,632,638	+				-3.1
3,632,641	-				-1.2
3,632,641	-				+1.2
3,632,641	-				+0.6
3,632,641	-				-2.0
3,632,641	-				+0.1
3,632,641	-				+0.8
3,632,641	-				-0.6
3,632,646	-				-1.0
3,632,646	-				+0.2
3,632,681	+				-0.8
3,632,716	+		MIT1002_03260	0.10	-0.9
3,632,716	+		MIT1002_03260	0.10	+1.2
3,632,724	-		MIT1002_03260	0.11	-0.9
3,632,736	-		MIT1002_03260	0.12	+1.4
3,632,741	-		MIT1002_03260	0.12	-0.8
3,632,855	+		MIT1002_03260	0.22	-1.9
3,632,858	-		MIT1002_03260	0.22	+0.1
3,632,911	+		MIT1002_03260	0.27	-0.2
3,632,917	+		MIT1002_03260	0.27	+2.4
3,632,925	-		MIT1002_03260	0.28	-0.4
3,632,948	+		MIT1002_03260	0.30	-0.2
3,633,048	+		MIT1002_03260	0.38	+0.2
3,633,048	+		MIT1002_03260	0.38	-0.7
3,633,054	-		MIT1002_03260	0.39	+0.2
3,633,096	+		MIT1002_03260	0.43	+0.5
3,633,109	-		MIT1002_03260	0.44	+2.2
3,633,127	-		MIT1002_03260	0.45	-0.3
3,633,244	+		MIT1002_03260	0.55	-0.4
3,633,244	+		MIT1002_03260	0.55	+0.4
3,633,252	-		MIT1002_03260	0.56	+0.4
3,633,252	-		MIT1002_03260	0.56	-0.7
3,633,282	-		MIT1002_03260	0.58	+1.5
3,633,363	-		MIT1002_03260	0.65	+0.6
3,633,402	-		MIT1002_03260	0.69	-0.8
3,633,409	+		MIT1002_03260	0.69	+0.9
3,633,409	+		MIT1002_03260	0.69	-0.3
3,633,427	-		MIT1002_03260	0.71	-2.1
3,633,434	-		MIT1002_03260	0.71	-0.3