Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03200

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,567,703	+				-2.3
3,567,890	+		MIT1002_03200	0.11	-0.3
3,567,946	-		MIT1002_03200	0.20	-1.8
3,568,031	-		MIT1002_03200	0.35	-0.3
3,568,036	+		MIT1002_03200	0.36	-3.0
3,568,036	+		MIT1002_03200	0.36	-0.5
3,568,044	-		MIT1002_03200	0.37	-2.0
3,568,044	-		MIT1002_03200	0.37	-2.0
3,568,050	-		MIT1002_03200	0.38	-0.2
3,568,102	-		MIT1002_03200	0.47	-0.6
3,568,125	-		MIT1002_03200	0.51	-0.9
3,568,153	+		MIT1002_03200	0.56	-2.9
3,568,153	+		MIT1002_03200	0.56	-1.7
3,568,153	+		MIT1002_03200	0.56	-1.9
3,568,192	+		MIT1002_03200	0.62	-2.7
3,568,211	+		MIT1002_03200	0.66	-2.5
3,568,225	-		MIT1002_03200	0.68	-1.3
3,568,476	+				-0.2
3,568,476	+				+0.3
3,568,482	+				-0.1
3,568,484	-				+0.1
3,568,503	-				-1.0
3,568,546	+				-0.5
3,568,615	+				-0.3
3,568,654	+				+0.6
3,568,690	+				-0.1
3,568,780	+				+0.0
3,568,792	+				-0.3
3,568,797	+				-1.9
3,568,845	+		MIT1002_03201	0.12	+1.1
3,568,851	+		MIT1002_03201	0.12	-1.3
3,568,853	-		MIT1002_03201	0.12	+0.2
3,568,891	+		MIT1002_03201	0.14	-0.7
3,568,899	-		MIT1002_03201	0.14	+1.3
3,568,909	-		MIT1002_03201	0.15	+0.3
3,568,927	+		MIT1002_03201	0.16	-0.7
3,568,927	+		MIT1002_03201	0.16	+2.2
3,568,927	+		MIT1002_03201	0.16	+1.5
3,568,942	-		MIT1002_03201	0.16	+0.4
3,568,973	+		MIT1002_03201	0.18	+1.3
3,568,976	-		MIT1002_03201	0.18	+0.3
3,568,981	-		MIT1002_03201	0.18	-1.3
3,569,120	+		MIT1002_03201	0.25	-1.9
3,569,181	+		MIT1002_03201	0.28	+1.2
3,569,204	-		MIT1002_03201	0.29	+1.4
3,569,210	-		MIT1002_03201	0.30	+0.0
3,569,302	-		MIT1002_03201	0.34	+1.0
3,569,347	+		MIT1002_03201	0.36	+0.3
3,569,350	-		MIT1002_03201	0.36	-1.8
3,569,355	-		MIT1002_03201	0.37	-2.7
3,569,391	-		MIT1002_03201	0.38	+0.1
3,569,406	+		MIT1002_03201	0.39	-0.7