Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03118

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,471,525	-		MIT1002_03116	0.83	+1.8
3,471,584	+		MIT1002_03116	0.88	+4.0
3,471,617	+				+2.9
3,471,622	+				+3.2
3,471,704	+				-0.9
3,471,710	-				+0.3
3,471,778	+				-0.5
3,471,778	+				+0.8
3,471,786	-				-0.4
3,471,786	-				+0.6
3,471,826	+				-1.5
3,471,826	+				+0.5
3,471,826	+				-0.1
3,471,826	+				+0.9
3,471,826	+				-0.8
3,471,834	-				-0.3
3,471,834	-				-1.0
3,471,834	-				+0.2
3,471,900	-				+0.5
3,471,972	-		MIT1002_03117	0.14	-0.9
3,471,991	+		MIT1002_03117	0.17	-0.9
3,471,999	+		MIT1002_03117	0.18	-1.9
3,472,020	+		MIT1002_03117	0.22	-0.9
3,472,138	+		MIT1002_03117	0.41	-3.3
3,472,143	+		MIT1002_03117	0.42	-0.5
3,472,143	+		MIT1002_03117	0.42	+0.2
3,472,146	-		MIT1002_03117	0.43	-0.7
3,472,229	-		MIT1002_03117	0.57	-1.7
3,472,262	+		MIT1002_03117	0.62	-1.2
3,472,270	-		MIT1002_03117	0.63	-1.2
3,472,566	+				-1.3
3,472,566	+				-1.1
3,472,566	+				-0.9
3,472,567	-				-0.4
3,472,567	-				-0.5
3,472,567	-				-0.4
3,472,567	-				+0.0
3,472,567	-				-1.5
3,472,623	+		MIT1002_03118	0.19	+0.8
3,472,631	-		MIT1002_03118	0.21	-0.4
3,472,724	-		MIT1002_03118	0.37	+0.2
3,472,730	+		MIT1002_03118	0.38	-1.0
3,472,740	+		MIT1002_03118	0.40	-1.8
3,472,748	-		MIT1002_03118	0.41	-0.8
3,472,753	-		MIT1002_03118	0.42	-1.3
3,472,775	+		MIT1002_03118	0.46	-0.9
3,472,790	+		MIT1002_03118	0.48	-1.6
3,472,811	-		MIT1002_03118	0.52	-1.1
3,472,863	+		MIT1002_03118	0.61	+0.4
3,472,863	+		MIT1002_03118	0.61	-0.7
3,472,893	-		MIT1002_03118	0.66	-0.9
3,472,948	+		MIT1002_03118	0.76	-1.4
3,472,948	+		MIT1002_03118	0.76	+0.3
3,472,948	+		MIT1002_03118	0.76	-0.2
3,473,068	-				-0.2
3,473,088	-				-0.6
3,473,098	-				-0.8
3,473,098	-				-2.6
3,473,197	+				-0.7
3,473,334	+		MIT1002_03119	0.15	-1.0
3,473,350	+		MIT1002_03119	0.16	+0.5
3,473,399	-		MIT1002_03119	0.20	+3.8
3,473,399	-		MIT1002_03119	0.20	+0.1
3,473,433	-		MIT1002_03119	0.22	-0.5
3,473,483	+		MIT1002_03119	0.26	+1.5
3,473,501	-		MIT1002_03119	0.27	+0.9
3,473,501	-		MIT1002_03119	0.27	+0.9
3,473,516	-		MIT1002_03119	0.29	+1.4
3,473,523	-		MIT1002_03119	0.29	-0.2
3,473,528	-		MIT1002_03119	0.29	+0.4
3,473,528	-		MIT1002_03119	0.29	+0.5
3,473,585	+		MIT1002_03119	0.34	-2.9
3,473,593	-		MIT1002_03119	0.34	-1.7
3,473,593	-		MIT1002_03119	0.34	-1.2
3,473,600	+		MIT1002_03119	0.35	+1.8
3,473,618	-		MIT1002_03119	0.36	+1.1
3,473,775	-		MIT1002_03119	0.48	-0.1
3,473,857	+		MIT1002_03119	0.54	+1.7
3,473,857	+		MIT1002_03119	0.54	+3.6
3,473,865	-		MIT1002_03119	0.54	-0.2
3,473,865	-		MIT1002_03119	0.54	+0.1
3,473,895	-		MIT1002_03119	0.56	-0.6
3,473,933	+		MIT1002_03119	0.59	-0.7
3,473,955	+		MIT1002_03119	0.61	-0.1
3,473,970	+		MIT1002_03119	0.62	-0.8
3,473,978	-		MIT1002_03119	0.62	+0.5
3,474,072	+		MIT1002_03119	0.69	-0.2