Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02974

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,311,023	+		MIT1002_02973	0.27	-1.8
3,311,110	+		MIT1002_02973	0.35	+0.2
3,311,145	+		MIT1002_02973	0.38	-2.1
3,311,145	+		MIT1002_02973	0.38	-1.9
3,311,145	+		MIT1002_02973	0.38	-1.0
3,311,153	-		MIT1002_02973	0.39	-3.1
3,311,153	-		MIT1002_02973	0.39	-2.0
3,311,205	+		MIT1002_02973	0.44	-1.9
3,311,242	+		MIT1002_02973	0.47	+0.2
3,311,242	+		MIT1002_02973	0.47	-2.5
3,311,255	-		MIT1002_02973	0.48	-1.9
3,311,263	+		MIT1002_02973	0.49	-2.3
3,311,271	-		MIT1002_02973	0.50	-1.4
3,311,276	-		MIT1002_02973	0.50	-0.8
3,311,327	+		MIT1002_02973	0.55	-1.1
3,311,327	+		MIT1002_02973	0.55	+1.2
3,311,332	+		MIT1002_02973	0.56	-3.3
3,311,332	+		MIT1002_02973	0.56	+0.2
3,311,332	+		MIT1002_02973	0.56	-1.4
3,311,332	+		MIT1002_02973	0.56	-1.7
3,311,332	+		MIT1002_02973	0.56	-1.5
3,311,332	+		MIT1002_02973	0.56	-2.2
3,311,335	-		MIT1002_02973	0.56	-1.3
3,311,412	+		MIT1002_02973	0.63	-0.0
3,311,412	+		MIT1002_02973	0.63	-0.0
3,311,412	+		MIT1002_02973	0.63	-0.1
3,311,412	+		MIT1002_02973	0.63	-1.5
3,311,496	+		MIT1002_02973	0.71	-3.2
3,311,503	+		MIT1002_02973	0.71	-2.3
3,311,557	+		MIT1002_02973	0.76	-1.4
3,311,557	+		MIT1002_02973	0.76	-1.7
3,311,557	+		MIT1002_02973	0.76	-3.1
3,311,557	+		MIT1002_02973	0.76	-3.1
3,311,557	+		MIT1002_02973	0.76	+0.2
3,311,565	-		MIT1002_02973	0.77	-1.7
3,311,565	-		MIT1002_02973	0.77	-1.9
3,311,565	-		MIT1002_02973	0.77	+1.5
3,311,608	+		MIT1002_02973	0.81	-1.1
3,311,608	+		MIT1002_02973	0.81	+0.5
3,311,621	+		MIT1002_02973	0.82	+0.6
3,311,661	-		MIT1002_02973	0.86	-2.2
3,311,665	-		MIT1002_02973	0.86	-1.1
3,311,704	-				-0.4
3,311,740	-				-1.6
3,311,809	-				-1.7
3,312,075	+		MIT1002_02974	0.14	-0.2
3,312,094	-		MIT1002_02974	0.16	-0.8
3,312,123	+		MIT1002_02974	0.20	-0.4
3,312,204	+		MIT1002_02974	0.29	+3.7
3,312,204	+		MIT1002_02974	0.29	-0.7
3,312,204	+		MIT1002_02974	0.29	-0.9
3,312,212	-		MIT1002_02974	0.30	+0.1
3,312,212	-		MIT1002_02974	0.30	-0.8
3,312,218	+		MIT1002_02974	0.31	-0.6
3,312,218	-		MIT1002_02974	0.31	-0.0
3,312,218	-		MIT1002_02974	0.31	+0.3
3,312,218	-		MIT1002_02974	0.31	-1.7
3,312,237	+		MIT1002_02974	0.33	-0.4
3,312,286	-		MIT1002_02974	0.39	-1.1
3,312,301	+		MIT1002_02974	0.41	-0.3
3,312,301	+		MIT1002_02974	0.41	-0.4
3,312,309	-		MIT1002_02974	0.42	-0.4
3,312,314	-		MIT1002_02974	0.42	+0.1
3,312,335	+		MIT1002_02974	0.45	-1.8
3,312,343	-		MIT1002_02974	0.46	+1.1
3,312,417	+		MIT1002_02974	0.55	-0.4
3,312,467	+		MIT1002_02974	0.60	-0.7
3,312,515	+		MIT1002_02974	0.66	-1.1
3,312,545	-		MIT1002_02974	0.70	-0.2
3,312,626	+		MIT1002_02974	0.79	+2.0
3,312,635	-		MIT1002_02974	0.80	-1.6
3,312,635	-		MIT1002_02974	0.80	+0.6
3,312,635	-		MIT1002_02974	0.80	-0.7
3,312,712	+		MIT1002_02974	0.89	-1.0
3,312,712	+		MIT1002_02974	0.89	+1.5
3,312,720	-				-0.4
3,312,853	+				+0.5
3,312,853	+				+0.6
3,312,861	-				+1.8
3,312,861	-				+0.9
3,312,866	+				-0.1
3,312,889	+				-0.4
3,312,940	+		MIT1002_02975	0.13	-0.1
3,313,062	-		MIT1002_02975	0.31	-0.7
3,313,144	-		MIT1002_02975	0.44	+1.3
3,313,149	+		MIT1002_02975	0.44	-0.9
3,313,149	+		MIT1002_02975	0.44	+0.0
3,313,149	+		MIT1002_02975	0.44	+0.2
3,313,157	-		MIT1002_02975	0.46	+0.1
3,313,157	-		MIT1002_02975	0.46	-0.9
3,313,167	+		MIT1002_02975	0.47	-0.2
3,313,169	+		MIT1002_02975	0.47	+0.4
3,313,243	-		MIT1002_02975	0.59	-0.3
3,313,268	-		MIT1002_02975	0.62	+1.3
3,313,275	-		MIT1002_02975	0.63	-0.6
3,313,286	+		MIT1002_02975	0.65	+1.7
3,313,294	-		MIT1002_02975	0.66	-1.6
3,313,294	-		MIT1002_02975	0.66	+1.9
3,313,294	-		MIT1002_02975	0.66	-0.6
3,313,339	+		MIT1002_02975	0.73	+0.1
3,313,388	-		MIT1002_02975	0.81	-0.1
3,313,409	+		MIT1002_02975	0.84	-1.9
3,313,409	+		MIT1002_02975	0.84	+1.4
3,313,430	+		MIT1002_02975	0.87	+0.2