Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02849

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,160,918	-		MIT1002_02848	0.67	+0.7
3,160,918	-		MIT1002_02848	0.67	+0.6
3,160,920	-		MIT1002_02848	0.67	+0.7
3,160,925	-		MIT1002_02848	0.67	+0.4
3,161,046	-		MIT1002_02848	0.72	-1.1
3,161,077	-		MIT1002_02848	0.73	+0.5
3,161,095	-		MIT1002_02848	0.74	+0.4
3,161,095	-		MIT1002_02848	0.74	-0.2
3,161,197	+		MIT1002_02848	0.78	+0.2
3,161,197	+		MIT1002_02848	0.78	+0.1
3,161,197	+		MIT1002_02848	0.78	-0.5
3,161,205	-		MIT1002_02848	0.78	+0.2
3,161,205	-		MIT1002_02848	0.78	-0.8
3,161,247	-		MIT1002_02848	0.80	+1.2
3,161,291	-		MIT1002_02848	0.82	+1.7
3,161,292	+		MIT1002_02848	0.82	+0.3
3,161,326	-		MIT1002_02848	0.83	-1.2
3,161,384	+		MIT1002_02848	0.85	-0.1
3,161,528	-				+1.0
3,161,618	+				-0.9
3,161,652	+				+1.6
3,161,667	+				+1.0
3,161,785	-				+1.4
3,161,802	+				-0.6
3,161,995	+		MIT1002_02849	0.29	+0.3
3,161,995	+		MIT1002_02849	0.29	+0.2
3,162,044	+		MIT1002_02849	0.34	-0.7
3,162,081	+		MIT1002_02849	0.39	-0.8
3,162,088	+		MIT1002_02849	0.40	-0.2
3,162,093	+		MIT1002_02849	0.40	-2.0
3,162,093	+		MIT1002_02849	0.40	-0.6
3,162,093	+		MIT1002_02849	0.40	-0.5
3,162,096	-		MIT1002_02849	0.40	+0.6
3,162,096	-		MIT1002_02849	0.40	-0.4
3,162,101	-		MIT1002_02849	0.41	+0.8
3,162,101	-		MIT1002_02849	0.41	+2.2
3,162,116	+		MIT1002_02849	0.43	-0.6
3,162,151	+		MIT1002_02849	0.47	+0.8
3,162,156	+		MIT1002_02849	0.47	+0.7
3,162,159	-		MIT1002_02849	0.48	-0.6
3,162,167	+		MIT1002_02849	0.49	+0.4
3,162,238	+		MIT1002_02849	0.57	-1.6
3,162,284	+		MIT1002_02849	0.62	-1.5
3,162,320	-		MIT1002_02849	0.67	-0.5
3,162,320	-		MIT1002_02849	0.67	+0.9
3,162,328	+		MIT1002_02849	0.67	+0.2
3,162,360	-		MIT1002_02849	0.71	-1.7
3,162,399	+		MIT1002_02849	0.76	-1.9
3,162,399	+		MIT1002_02849	0.76	-0.6
3,162,425	+		MIT1002_02849	0.79	-1.1
3,162,425	+		MIT1002_02849	0.79	-1.6
3,162,471	+		MIT1002_02849	0.84	-0.2
3,162,494	+		MIT1002_02849	0.87	-0.5
3,162,561	-				-0.2
3,162,566	-				-0.3
3,162,568	-				-0.2