Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02838

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
3,146,511	-		MIT1002_02837	0.26	-0.5
3,146,524	+		MIT1002_02837	0.27	-1.6
3,146,532	-		MIT1002_02837	0.28	+0.3
3,146,534	+		MIT1002_02837	0.29	-0.6
3,146,544	+		MIT1002_02837	0.30	+0.9
3,146,552	-		MIT1002_02837	0.31	+0.0
3,146,552	-		MIT1002_02837	0.31	-0.4
3,146,552	-		MIT1002_02837	0.31	-0.6
3,146,626	+		MIT1002_02837	0.39	-0.6
3,146,634	-		MIT1002_02837	0.39	-0.2
3,146,675	-		MIT1002_02837	0.44	-0.6
3,146,756	+		MIT1002_02837	0.53	-0.3
3,146,768	+		MIT1002_02837	0.54	-0.3
3,146,891	+		MIT1002_02837	0.67	+3.1
3,146,910	+		MIT1002_02837	0.69	-0.7
3,146,910	+		MIT1002_02837	0.69	-1.5
3,146,918	-		MIT1002_02837	0.70	+0.2
3,146,920	+		MIT1002_02837	0.70	-0.1
3,146,934	+		MIT1002_02837	0.72	-0.3
3,146,942	-		MIT1002_02837	0.73	+0.7
3,146,952	-		MIT1002_02837	0.74	+0.2
3,147,057	-		MIT1002_02837	0.85	-2.5
3,147,060	+		MIT1002_02837	0.85	+0.9
3,147,081	+		MIT1002_02837	0.88	+0.8
3,147,141	+				+0.1
3,147,141	+				-0.9
3,147,153	+				+0.3
3,147,161	-				-2.1
3,147,205	-				+0.7
3,147,205	-				+1.0
3,147,286	-				+2.4
3,147,292	-				-0.5
3,147,295	+				+0.8
3,147,398	+				-0.8
3,147,398	+				-0.4
3,147,406	-				+1.0
3,147,506	-				+0.1
3,147,517	+		MIT1002_02838	0.12	-1.6
3,147,524	-		MIT1002_02838	0.13	-0.5
3,147,532	-		MIT1002_02838	0.14	+0.1
3,147,550	-		MIT1002_02838	0.17	+0.8
3,147,615	-		MIT1002_02838	0.29	-0.6
3,147,615	-		MIT1002_02838	0.29	-0.2
3,147,691	+		MIT1002_02838	0.42	-0.3
3,147,691	+		MIT1002_02838	0.42	-0.5
3,147,709	-		MIT1002_02838	0.45	-0.1
3,147,895	+		MIT1002_02838	0.78	-0.4
3,147,900	-		MIT1002_02838	0.79	-0.2
3,147,948	-		MIT1002_02838	0.87	-0.0
3,147,984	-				-1.4
3,147,986	+				+0.1
3,147,986	+				-0.1
3,147,994	-				-0.0
3,148,155	-				-0.6
3,148,202	+				-3.0
3,148,203	-				+0.3
3,148,236	+				-0.8
3,148,409	+		MIT1002_02839	0.10	+1.0
3,148,415	-		MIT1002_02839	0.10	-0.5
3,148,444	+		MIT1002_02839	0.12	-0.7
3,148,484	-		MIT1002_02839	0.15	-1.9
3,148,494	-		MIT1002_02839	0.15	-0.2
3,148,520	-		MIT1002_02839	0.17	+0.2
3,148,589	+		MIT1002_02839	0.21	+1.0
3,148,686	+		MIT1002_02839	0.27	-0.6
3,148,696	-		MIT1002_02839	0.28	+0.7
3,148,704	+		MIT1002_02839	0.28	-0.8
3,148,712	-		MIT1002_02839	0.29	-0.4
3,148,712	-		MIT1002_02839	0.29	-1.4
3,148,712	-		MIT1002_02839	0.29	+0.3
3,148,815	-		MIT1002_02839	0.35	-0.6
3,148,836	-		MIT1002_02839	0.36	-0.4
3,148,936	+		MIT1002_02839	0.42	-0.6
3,148,996	+		MIT1002_02839	0.46	-1.0
3,149,004	-		MIT1002_02839	0.46	+1.2