Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02414

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
2,695,261	-				+3.1
2,695,346	+				-0.9
2,695,351	+				+2.1
2,695,351	+				+0.3
2,695,364	-		MIT1002_02413	0.10	-0.9
2,695,364	-		MIT1002_02413	0.10	+0.4
2,695,439	-		MIT1002_02413	0.19	-0.9
2,695,497	-		MIT1002_02413	0.27	-0.8
2,695,611	-		MIT1002_02413	0.41	+0.3
2,695,611	-		MIT1002_02413	0.41	+0.7
2,695,626	+		MIT1002_02413	0.43	+1.3
2,695,626	+		MIT1002_02413	0.43	-2.7
2,695,626	+		MIT1002_02413	0.43	-0.3
2,695,626	+		MIT1002_02413	0.43	+0.2
2,695,634	-		MIT1002_02413	0.44	-0.4
2,695,634	-		MIT1002_02413	0.44	+0.8
2,695,712	-		MIT1002_02413	0.53	+1.2
2,695,719	+		MIT1002_02413	0.54	-1.2
2,695,719	+		MIT1002_02413	0.54	+0.2
2,695,790	+		MIT1002_02413	0.63	+1.5
2,695,790	+		MIT1002_02413	0.63	-0.5
2,695,790	+		MIT1002_02413	0.63	-1.0
2,695,790	+		MIT1002_02413	0.63	-0.5
2,695,790	+		MIT1002_02413	0.63	-0.0
2,695,806	+		MIT1002_02413	0.65	-0.5
2,695,856	-		MIT1002_02413	0.71	+0.3
2,695,931	-		MIT1002_02413	0.80	+0.7
2,695,964	-		MIT1002_02413	0.85	+2.4
2,696,276	-		MIT1002_02414	0.11	+0.7
2,696,292	+		MIT1002_02414	0.14	+0.7
2,696,337	+		MIT1002_02414	0.21	-1.9
2,696,341	-		MIT1002_02414	0.22	-0.5
2,696,596	-		MIT1002_02414	0.64	+0.9
2,696,621	-		MIT1002_02414	0.69	-0.9
2,696,637	-		MIT1002_02414	0.71	+0.5
2,696,661	+		MIT1002_02414	0.75	-1.1
2,696,664	-		MIT1002_02414	0.76	+0.4
2,696,690	+		MIT1002_02414	0.80	-2.4
2,696,693	-		MIT1002_02414	0.81	-0.6
2,696,749	-		MIT1002_02414	0.90	-1.2
2,696,773	-				-1.1
2,696,839	-				+0.6
2,696,853	-				-1.5
2,696,983	-				+2.0
2,697,109	+				+4.3
2,697,140	-				+2.6
2,697,147	-				+0.3
2,697,393	+				-0.3
2,697,480	+				-0.8
2,697,505	-				-0.2
2,697,655	-		MIT1002_02415	0.18	-0.3
2,697,757	-		MIT1002_02415	0.29	+2.1
2,697,791	+		MIT1002_02415	0.32	+0.4