Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02105

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
2,363,836	-		MIT1002_02103	0.62	-0.2
2,363,847	-		MIT1002_02103	0.65	-0.3
2,363,977	+				-0.2
2,364,029	-				+0.6
2,364,058	+		MIT1002_02104	0.13	-1.1
2,364,103	+		MIT1002_02104	0.18	+0.7
2,364,106	-		MIT1002_02104	0.18	-1.0
2,364,106	-		MIT1002_02104	0.18	+0.5
2,364,106	-		MIT1002_02104	0.18	+0.0
2,364,106	-		MIT1002_02104	0.18	-0.1
2,364,122	+		MIT1002_02104	0.20	-0.0
2,364,131	-		MIT1002_02104	0.21	+0.9
2,364,177	-		MIT1002_02104	0.26	-1.0
2,364,198	-		MIT1002_02104	0.29	-1.5
2,364,243	-		MIT1002_02104	0.34	-0.2
2,364,251	+		MIT1002_02104	0.35	+0.3
2,364,281	+		MIT1002_02104	0.38	-0.1
2,364,289	-		MIT1002_02104	0.39	+1.0
2,364,306	+		MIT1002_02104	0.41	-3.4
2,364,306	+		MIT1002_02104	0.41	-0.2
2,364,314	-		MIT1002_02104	0.42	-0.5
2,364,314	-		MIT1002_02104	0.42	-0.3
2,364,321	+		MIT1002_02104	0.43	-0.9
2,364,358	-		MIT1002_02104	0.47	+2.0
2,364,371	+		MIT1002_02104	0.48	+0.3
2,364,371	+		MIT1002_02104	0.48	-0.7
2,364,435	-		MIT1002_02104	0.56	+0.0
2,364,462	-		MIT1002_02104	0.59	+0.2
2,364,479	+		MIT1002_02104	0.61	+1.8
2,364,501	+		MIT1002_02104	0.63	+0.6
2,364,502	+		MIT1002_02104	0.63	+0.0
2,364,577	-		MIT1002_02104	0.72	+1.7
2,364,582	-		MIT1002_02104	0.72	-0.4
2,364,582	-		MIT1002_02104	0.72	+0.5
2,364,582	-		MIT1002_02104	0.72	+0.2
2,364,637	-		MIT1002_02104	0.79	+0.1
2,364,656	-		MIT1002_02104	0.81	-0.2
2,364,665	+		MIT1002_02104	0.82	-0.3
2,364,675	+		MIT1002_02104	0.83	+3.5
2,364,703	+		MIT1002_02104	0.86	+2.2
2,364,754	+				+0.0
2,364,821	+				-1.3
2,364,857	-		MIT1002_02105	0.17	+1.2
2,364,858	-		MIT1002_02105	0.18	-0.1
2,364,862	-		MIT1002_02105	0.19	+0.1
2,364,864	+		MIT1002_02105	0.20	-2.5
2,365,001	+		MIT1002_02105	0.84	-1.0
2,365,001	+		MIT1002_02105	0.84	-0.2
2,365,001	+		MIT1002_02105	0.84	+3.5
2,365,001	+		MIT1002_02105	0.84	-0.1
2,365,001	+		MIT1002_02105	0.84	+1.9
2,365,001	+		MIT1002_02105	0.84	-2.4
2,365,001	+		MIT1002_02105	0.84	+0.0
2,365,001	+		MIT1002_02105	0.84	+0.0
2,365,009	-		MIT1002_02105	0.88	+0.4
2,365,009	-		MIT1002_02105	0.88	+0.9
2,365,009	-		MIT1002_02105	0.88	-0.6
2,365,011	-		MIT1002_02105	0.88	-0.9
2,365,019	+				-0.8
2,365,022	-				-1.4
2,365,022	-				-1.5
2,365,024	+				-0.1
2,365,027	-				+0.3
2,365,027	-				+0.8
2,365,027	-				+0.3
2,365,034	-				-0.7
2,365,041	+				-0.3
2,365,049	+				+0.8
2,365,057	-				+0.2
2,365,170	+				-0.2
2,365,259	+				+0.1
2,365,259	+				-0.5
2,365,259	+				-1.8
2,365,267	-				-0.0
2,365,267	-				-0.1
2,365,372	+				+0.6
2,365,372	+				-0.8
2,365,380	-				-0.6
2,365,394	-				-0.4
2,365,394	-				+0.0
2,365,458	-		MIT1002_02106	0.14	-1.8
2,365,522	+		MIT1002_02106	0.26	+0.7
2,365,523	+		MIT1002_02106	0.27	+0.0
2,365,523	+		MIT1002_02106	0.27	+0.9
2,365,523	+		MIT1002_02106	0.27	+0.1
2,365,523	+		MIT1002_02106	0.27	-0.9
2,365,531	-		MIT1002_02106	0.28	-0.2
2,365,578	-		MIT1002_02106	0.38	+0.2
2,365,583	-		MIT1002_02106	0.38	+1.3
2,365,628	+		MIT1002_02106	0.47	+1.2
2,365,683	-		MIT1002_02106	0.58	+2.0
2,365,685	+		MIT1002_02106	0.59	+0.2
2,365,693	-		MIT1002_02106	0.60	+0.4
2,365,697	+		MIT1002_02106	0.61	+0.9
2,365,749	-		MIT1002_02106	0.71	-0.1
2,365,758	+		MIT1002_02106	0.73	+0.4
2,365,763	+		MIT1002_02106	0.74	+0.2
2,365,868	+				+0.6
2,365,869	+				-0.5
2,365,876	-				+0.0
2,365,909	+				+0.2
2,365,944	+				-2.2
2,365,944	+				+0.3