Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01937

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
2,149,574	+				+1.6
2,149,631	-				+0.4
2,149,653	-				+0.3
2,149,670	-		MIT1002_01936	0.12	+1.5
2,149,680	-		MIT1002_01936	0.13	-2.3
2,149,680	-		MIT1002_01936	0.13	+0.1
2,149,680	-		MIT1002_01936	0.13	-0.6
2,149,728	+		MIT1002_01936	0.20	+0.0
2,149,728	+		MIT1002_01936	0.20	-0.0
2,149,731	-		MIT1002_01936	0.20	+1.1
2,149,811	+		MIT1002_01936	0.30	+0.1
2,149,831	-		MIT1002_01936	0.33	-2.6
2,149,833	-		MIT1002_01936	0.33	-0.2
2,149,838	-		MIT1002_01936	0.34	-0.9
2,149,864	-		MIT1002_01936	0.37	-0.2
2,149,917	+		MIT1002_01936	0.44	-2.8
2,149,990	+		MIT1002_01936	0.53	+0.0
2,150,000	-		MIT1002_01936	0.55	-1.3
2,150,027	+		MIT1002_01936	0.58	-1.2
2,150,060	-		MIT1002_01936	0.62	-0.7
2,150,116	-		MIT1002_01936	0.69	-0.2
2,150,204	-		MIT1002_01936	0.81	+0.8
2,150,204	-		MIT1002_01936	0.81	+0.8
2,150,229	-		MIT1002_01936	0.84	-1.6
2,150,279	-				-0.8
2,150,304	-				-0.4
2,150,360	-				-0.2
2,150,416	+				-0.9
2,150,422	-				-0.3
2,150,424	-				-1.2
2,150,424	-				+0.6
2,150,436	+				+0.0
2,150,456	+				-0.8
2,150,514	+				+2.0
2,150,576	+				+0.4
2,150,784	+		MIT1002_01937	0.22	+0.1
2,150,810	+		MIT1002_01937	0.25	+0.1
2,150,929	-		MIT1002_01937	0.37	+1.5
2,150,956	+		MIT1002_01937	0.40	+0.9
2,150,956	-		MIT1002_01937	0.40	+1.4
2,150,956	-		MIT1002_01937	0.40	-0.3
2,151,133	+		MIT1002_01937	0.58	+0.4
2,151,141	-		MIT1002_01937	0.59	-0.0
2,151,141	-		MIT1002_01937	0.59	+0.8
2,151,185	+		MIT1002_01937	0.63	+0.7
2,151,198	-		MIT1002_01937	0.65	-0.0
2,151,210	-		MIT1002_01937	0.66	+0.6
2,151,242	-		MIT1002_01937	0.69	-0.8
2,151,289	+		MIT1002_01937	0.74	+0.6
2,151,305	+		MIT1002_01937	0.76	+0.0
2,151,351	+		MIT1002_01937	0.81	-0.3
2,151,455	-				+0.6
2,151,470	-				-0.5
2,151,470	-				+0.6
2,151,489	-				-0.5
2,151,499	-				+1.9
2,151,509	+				+0.6
2,151,543	+				+0.8
2,151,619	+				+1.2
2,151,619	+				-1.0
2,151,621	-				+0.2
2,151,678	+				+1.2
2,151,724	+		MIT1002_01938	0.12	+0.2
2,151,725	+		MIT1002_01938	0.12	-0.5
2,151,728	+		MIT1002_01938	0.12	+0.8
2,151,736	-		MIT1002_01938	0.13	-1.7
2,151,793	-		MIT1002_01938	0.20	-0.6
2,151,893	-		MIT1002_01938	0.31	+0.7
2,151,929	+		MIT1002_01938	0.35	+0.2
2,151,984	+		MIT1002_01938	0.42	+0.9
2,151,991	+		MIT1002_01938	0.43	+0.8
2,151,992	-		MIT1002_01938	0.43	+1.3
2,151,992	-		MIT1002_01938	0.43	+0.8
2,152,004	-		MIT1002_01938	0.44	+0.8
2,152,011	-		MIT1002_01938	0.45	-0.7
2,152,051	+		MIT1002_01938	0.50	+0.0
2,152,073	-		MIT1002_01938	0.52	-1.4
2,152,097	+		MIT1002_01938	0.55	-1.1
2,152,119	+		MIT1002_01938	0.57	-1.0
2,152,121	+		MIT1002_01938	0.58	-2.0
2,152,180	-		MIT1002_01938	0.64	-1.6
2,152,220	+		MIT1002_01938	0.69	-0.8
2,152,368	-		MIT1002_01938	0.86	+0.1
2,152,418	+				-0.4
2,152,510	-				+0.5
2,152,526	-				-2.4